Human Gene DPP4 (ENST00000360534.8_10) from GENCODE V47lift37
  Description: dipeptidyl peptidase 4, transcript variant 8 (from RefSeq NR_166825.1)
Gencode Transcript: ENST00000360534.8_10
Gencode Gene: ENSG00000197635.11_16
Transcript (Including UTRs)
   Position: hg19 chr2:162,848,755-162,930,725 Size: 81,971 Total Exon Count: 26 Strand: -
Coding Region
   Position: hg19 chr2:162,849,793-162,930,491 Size: 80,699 Coding Exon Count: 26 

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Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:162,848,755-162,930,725)mRNA (may differ from genome)Protein (766 aa)
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-  Comments and Description Text from UniProtKB
  ID: DPP4_HUMAN
DESCRIPTION: RecName: Full=Dipeptidyl peptidase 4; EC=3.4.14.5; AltName: Full=ADABP; AltName: Full=Adenosine deaminase complexing protein 2; Short=ADCP-2; AltName: Full=Dipeptidyl peptidase IV; Short=DPP IV; AltName: Full=T-cell activation antigen CD26; AltName: Full=TP103; AltName: CD_antigen=CD26; Contains: RecName: Full=Dipeptidyl peptidase 4 membrane form; AltName: Full=Dipeptidyl peptidase IV membrane form; Contains: RecName: Full=Dipeptidyl peptidase 4 soluble form; AltName: Full=Dipeptidyl peptidase IV soluble form;
FUNCTION: Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF- kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones. Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.
CATALYTIC ACTIVITY: Release of an N-terminal dipeptide, Xaa-Yaa-|- Zaa-, from a polypeptide, preferentially when Yaa is Pro, provided Zaa is neither Pro nor hydroxyproline.
ENZYME REGULATION: Inhibited by GPC3 and diprotin A.
SUBUNIT: Monomer. Homodimer or heterodimer with Seprase (FAP). Requires homodimerization for optimal dipeptidyl peptidase activity and T-cell costimulation. Found in a membrane raft complex, at least composed of BCL10, CARD11, DPP4 and IKBKB. Associates with collagen. Interacts with PTPRC; the interaction is enhanced in a interleukin-12-dependent manner in activated lymphocytes. Interacts (extracellular domain) with ADA; does not inhibit its dipeptidyl peptidase activity. Interacts with CAV1 (via the N-terminus); the interaction is direct. Interacts (via cytoplasmic tail) with CARD11 (via PDZ domain); its homodimerization is necessary for interaction with CARD11. Interacts with IGF2R; the interaction is direct. Interacts with GPC3.
SUBCELLULAR LOCATION: Dipeptidyl peptidase 4 soluble form: Secreted. Note=Detected in the serum and the seminal fluid.
SUBCELLULAR LOCATION: Cell membrane; Single-pass type II membrane protein. Apical cell membrane; Single-pass type II membrane protein. Cell projection, invadopodium membrane; Single-pass type II membrane protein. Cell projection, lamellipodium membrane; Single-pass type II membrane protein. Cell junction. Membrane raft. Note=Translocated to the apical membrane through the concerted action of N- and O-Glycans and its association with lipid microdomains containing cholesterol and sphingolipids. Redistributed to membrane rafts in T-cell in a interleukin-12- dependent activation. Its interaction with CAV1 is necessary for its translocation to membrane rafts. Colocalized with PTPRC in membrane rafts. Colocalized with FAP in invadopodia and lamellipodia of migratory activated endothelial cells in collagenous matrix. Colocalized with FAP on endothelial cells of capillary-like microvessels but not large vessels within invasive breast ductal carcinoma. Colocalized with ADA at the cell junction in lymphocyte-epithelial cell adhesion. Colocalized with IGF2R in internalized cytoplasmic vesicles adjacent to the cell surface.
TISSUE SPECIFICITY: Expressed specifically in lymphatic vessels but not in blood vessels in the skin, small intestine, esophagus, ovary, breast and prostate glands. Not detected in lymphatic vessels in the lung, kidney, uterus, liver and stomach (at protein level). Expressed in the poorly differentiated crypt cells of the small intestine as well as in the mature villous cells. Expressed at very low levels in the colon.
INDUCTION: Up-regulated by IL12/interleukin-12 on activated T- cells. IL12-activated cells expressed enhanced levels of DPP4 but not mRNAs. Down-regulated by TNF. Up-regulated in migratory endothelial cells and in the invasive endothelial cells in tumors.
DOMAIN: The extracellular cysteine-rich region is necessary for association with collagen, dimer formation and optimal dipeptidyl peptidase activity.
PTM: The soluble form (Dipeptidyl peptidase 4 soluble form also named SDPP) derives from the membrane form (Dipeptidyl peptidase 4 membrane form also named MDPP) by proteolytic processing.
PTM: N- and O-Glycosylated.
PTM: Phosphorylated. Mannose 6-phosphate residues in the carbohydrate moiety are necessary for interaction with IGF2R in activated T-cells. Mannose 6-phosphorylation is induced during T- cell activation.
MISCELLANEOUS: Level of plasma concentrations of the soluble form (SDPP) can be managed as a colon carcinoma diagnostic and prognostic marker.
SIMILARITY: Belongs to the peptidase S9B family. DPPIV subfamily.
WEB RESOURCE: Name=Wikipedia; Note=Dipeptidyl peptidase-4 entry; URL="http://en.wikipedia.org/wiki/Dipeptidyl_peptidase-4";

-  Primer design for this transcript
 

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Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: DPP4
Diseases sorted by gene-association score: nasopharyngitis (22), endocrine pancreas disease (13), prediabetes syndrome (12), nasopharyngeal disease (11), hyperglycemia (9), alk-negative anaplastic large cell lymphoma (9), hepatosplenic t-cell lymphoma (9), glucose metabolism disease (9), simpson-golabi-behmel syndrome (8), follicular adenoma (8), pancreas disease (8), sezary's disease (8), mycosis fungoides (8), angioedema (8), acquired metabolic disease (6), glucose intolerance (6), hemophagocytic lymphohistiocytosis, familial, 5 (6), diabetes mellitus, noninsulin-dependent (5), mental depression (5), pneumatosis cystoides intestinalis (5), specific bursitis often of occupational origin (4), olecranon bursitis (4), nodular malignant melanoma (4), maturity-onset diabetes of the young (2), diabetes mellitus, insulin-dependent (2), thyroid cancer, nonmedullary, 2 (1), obesity (1)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 28.01 RPKM in Small Intestine - Terminal Ileum
Total median expression: 142.76 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -98.10234-0.419 Picture PostScript Text
3' UTR -237.701038-0.229 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR002471 - Pept_S9_AS
IPR001375 - Peptidase_S9
IPR002469 - Peptidase_S9B

Pfam Domains:
PF00326 - Prolyl oligopeptidase family
PF00930 - Dipeptidyl peptidase IV (DPP IV) N-terminal region
PF01738 - Dienelactone hydrolase family

SCOP Domains:
46785 - "Winged helix" DNA-binding domain
50952 - Soluble quinoprotein glucose dehydrogenase
50960 - TolB, C-terminal domain
63825 - YWTD domain
63829 - Calcium-dependent phosphotriesterase
69304 - Tricorn protease N-terminal domain
101898 - NHL repeat
75011 - 3-carboxy-cis,cis-mucoante lactonizing enzyme
101908 - Putative isomerase YbhE
117289 - Nucleoporin domain
50969 - YVTN repeat-like/Quinoprotein amine dehydrogenase
50974 - Nitrous oxide reductase, N-terminal domain
50978 - WD40 repeat-like
50993 - Peptidase/esterase 'gauge' domain
69322 - Tricorn protease domain 2
50998 - Quinoprotein alcohol dehydrogenase-like
51004 - C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases
55486 - Metalloproteases ("zincins"), catalytic domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help
1J2E - X-ray MuPIT 1N1M - X-ray MuPIT 1NU6 - X-ray MuPIT 1NU8 - X-ray MuPIT 1PFQ - X-ray MuPIT 1R9M - X-ray MuPIT 1R9N - X-ray MuPIT 1RWQ - X-ray MuPIT 1TK3 - X-ray MuPIT 1TKR - X-ray MuPIT 1U8E - X-ray MuPIT 1W1I - X-ray MuPIT 1WCY - X-ray MuPIT 1X70 - X-ray MuPIT 2AJL - X-ray MuPIT 2BGN - X-ray MuPIT 2BGR - X-ray MuPIT 2BUB - X-ray MuPIT 2FJP - X-ray MuPIT 2G5P - X-ray MuPIT 2G5T - X-ray MuPIT 2G63 - X-ray MuPIT 2HHA - X-ray MuPIT 2I03 - X-ray MuPIT 2I78 - X-ray MuPIT 2IIT - X-ray MuPIT 2IIV - X-ray MuPIT 2JID - X-ray MuPIT 2OAG - X-ray MuPIT 2OGZ - X-ray MuPIT 2OLE - X-ray MuPIT 2ONC - X-ray MuPIT 2OPH - X-ray MuPIT 2OQI - X-ray MuPIT 2OQV - X-ray MuPIT 2P8S - X-ray MuPIT 2QJR - X-ray MuPIT 2QKY - X-ray MuPIT 2QOE - X-ray MuPIT 2QT9 - X-ray MuPIT 2QTB - X-ray MuPIT 2RGU - X-ray MuPIT 2RIP - X-ray MuPIT 3BJM - X-ray 3C43 - X-ray MuPIT 3C45 - X-ray MuPIT 3CCB - X-ray MuPIT 3CCC - X-ray MuPIT 3D4L - X-ray MuPIT 3EIO - X-ray MuPIT 3F8S - X-ray MuPIT 3G0B - X-ray MuPIT 3G0C - X-ray MuPIT 3G0D - X-ray MuPIT 3G0G - X-ray MuPIT 3H0C - X-ray 3HAB - X-ray MuPIT 3HAC - X-ray MuPIT 3KWF - X-ray 3KWJ - X-ray MuPIT 3NOX - X-ray MuPIT 3O95 - X-ray MuPIT 3O9V - X-ray MuPIT 3OC0 - X-ray 3OPM - X-ray MuPIT 3Q0T - X-ray MuPIT 3Q8W - X-ray MuPIT 3QBJ - X-ray MuPIT 3SWW - X-ray MuPIT 3SX4 - X-ray MuPIT 3VJM - X-ray MuPIT 4A5S - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on P27487
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologGenome Browser
Gene DetailsGene Details Gene Details Gene Details
Gene SorterGene Sorter Gene Sorter Gene Sorter
 RGD   SGD
     Protein Sequence
     Alignment

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0001618 virus receptor activity
GO:0002020 protease binding
GO:0004177 aminopeptidase activity
GO:0004252 serine-type endopeptidase activity
GO:0005102 receptor binding
GO:0005515 protein binding
GO:0008233 peptidase activity
GO:0008236 serine-type peptidase activity
GO:0008239 dipeptidyl-peptidase activity
GO:0016787 hydrolase activity
GO:0042802 identical protein binding
GO:0042803 protein homodimerization activity

Biological Process:
GO:0001662 behavioral fear response
GO:0001666 response to hypoxia
GO:0006508 proteolysis
GO:0007155 cell adhesion
GO:0008284 positive regulation of cell proliferation
GO:0010716 negative regulation of extracellular matrix disassembly
GO:0031295 T cell costimulation
GO:0033632 regulation of cell-cell adhesion mediated by integrin
GO:0035641 locomotory exploration behavior
GO:0036343 psychomotor behavior
GO:0042110 T cell activation
GO:0043542 endothelial cell migration
GO:0046718 viral entry into host cell
GO:0050796 regulation of insulin secretion

Cellular Component:
GO:0005576 extracellular region
GO:0005765 lysosomal membrane
GO:0005886 plasma membrane
GO:0005925 focal adhesion
GO:0009986 cell surface
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0016324 apical plasma membrane
GO:0030027 lamellipodium
GO:0030054 cell junction
GO:0030139 endocytic vesicle
GO:0031258 lamellipodium membrane
GO:0042995 cell projection
GO:0045121 membrane raft
GO:0046581 intercellular canaliculus
GO:0070062 extracellular exosome
GO:0071438 invadopodium membrane


-  Descriptions from all associated GenBank mRNAs
  BC065265 - Homo sapiens dipeptidyl-peptidase 4, mRNA (cDNA clone MGC:74748 IMAGE:6156880), complete cds.
X60708 - Human pcHDP7 mRNA for liver dipeptidyl peptidase IV.
M74777 - Homo sapiens dipeptidyl peptidase IV (CD26) mRNA, complete cds.
BC013329 - Homo sapiens dipeptidyl-peptidase 4, mRNA (cDNA clone IMAGE:4272938), partial cds.
M80536 - H.sapiens dipeptidyl peptidase IV (DPP4) mRNA, complete cds.
AK314798 - Homo sapiens cDNA, FLJ95671.
AB451339 - Homo sapiens DPP4 mRNA for dipeptidylpeptidase IV, complete cds, clone: FLJ85507SAAN.
KJ896722 - Synthetic construct Homo sapiens clone ccsbBroadEn_06116 DPP4 gene, encodes complete protein.
AB451488 - Homo sapiens DPP4 mRNA for dipeptidylpeptidase IV, partial cds, clone: FLJ85507SAAF.
AB590646 - Synthetic construct DNA, clone: pFN21AB5778, Homo sapiens DPP4 gene for dipeptidyl-peptidase 4, without stop codon, in Flexi system.
AY429533 - Homo sapiens DPP4v_3 mRNA sequence; alternatively spliced.
AY429532 - Homo sapiens DPP4v_2 mRNA sequence; alternatively spliced.
AY429531 - Homo sapiens DPP4v_1 mRNA sequence; alternatively spliced.
JD120035 - Sequence 101059 from Patent EP1572962.
JD063032 - Sequence 44056 from Patent EP1572962.
JD187752 - Sequence 168776 from Patent EP1572962.
JD039564 - Sequence 20588 from Patent EP1572962.
JD037977 - Sequence 19001 from Patent EP1572962.
JD062266 - Sequence 43290 from Patent EP1572962.
JD514530 - Sequence 495554 from Patent EP1572962.
JD183373 - Sequence 164397 from Patent EP1572962.
JD323863 - Sequence 304887 from Patent EP1572962.
JD546603 - Sequence 527627 from Patent EP1572962.
JD450145 - Sequence 431169 from Patent EP1572962.
JD489004 - Sequence 470028 from Patent EP1572962.
JD454545 - Sequence 435569 from Patent EP1572962.
DD153952 - New method.
DD153953 - New method.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein P27487 (Reactome details) participates in the following event(s):

R-HSA-9023626 DPP4(39-766) hydrolyzes Glucose-dependent Insulinotropic Polypeptide (GIP)
R-HSA-9023632 DPP4(39-766) hydrolyzes Glucagon-like Peptide-1 (GLP-1)
R-HSA-9023627 DPP4(1-766) hydrolyzes Glucose-dependent Insulinotropic Polypeptide (GIP)
R-HSA-9023633 DPP4(1-766) hydrolyzes Glucagon-like Peptide-1 (GLP-1)
R-HSA-400511 Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
R-HSA-381771 Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
R-HSA-400508 Incretin synthesis, secretion, and inactivation
R-HSA-2980736 Peptide hormone metabolism
R-HSA-392499 Metabolism of proteins

-  Other Names for This Gene
  Alternate Gene Symbols: ADCP2, CD26, DPP4 , DPP4_HUMAN, ENST00000360534.1, ENST00000360534.2, ENST00000360534.3, ENST00000360534.4, ENST00000360534.5, ENST00000360534.6, ENST00000360534.7, NR_166825, P27487, Q53TN1, uc318bpl.1, uc318bpl.2
UCSC ID: ENST00000360534.8_10
RefSeq Accession: NM_001935.4
Protein: P27487 (aka DPP4_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.