Human Gene FAM193A (ENST00000637812.2_10) from GENCODE V47lift37

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Description: family with sequence similarity 193 member A, transcript variant 8 (from RefSeq NM_001366318.2)
Gencode Transcript: ENST00000637812.2_10
Gencode Gene: ENSG00000125386.16_15
Transcript (Including UTRs)
Position: hg19 chr4:2,538,374-2,734,300 Size: 195,927 Total Exon Count: 21 Strand: +
Coding Region
Position: hg19 chr4:2,538,643-2,733,595 Size: 194,953 Coding Exon Count: 21

Page Index	Sequence and Links	Primers	CTD	Gene Alleles	Microarray Expression
RNA Structure	Other Species	mRNA Descriptions	Other Names	Model Information	Methods

Data last updated at UCSC: 2024-08-22 23:36:26

Sequence and Links to Tools and Databases

Genomic Sequence (chr4:2,538,374-2,734,300)			mRNA (may differ from genome)		Protein (1515 aa)
Gene Sorter	Genome Browser	Other Species FASTA	VisiGene	Gene interactions	Table Schema
AlphaFold	BioGPS	Ensembl	Entrez Gene	ExonPrimer	GeneCards
HGNC	MGI	PubMed	UniProtKB	Wikipedia	BioGrid CRISPR DB

Primer design for this transcript

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3

Comparative Toxicogenomics Database (CTD)


	The following chemicals interact with this gene C111118 2',3,3',4',5-pentachloro-4-hydroxybiphenyl D015123 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide D016604 Aflatoxin B1 D002737 Chloroprene D003993 Dibutyl Phthalate D004026 Dieldrin D013196 Dihydrotestosterone D005557 Formaldehyde D011794 Quercetin C028007 nickel monoxide C025643 vinclozolin

Common Gene Haplotype Alleles


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Microarray Expression Data


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mRNA Secondary Structure of 3' and 5' UTRs

Region	Fold Energy	Bases	Energy/Base	Display As
5' UTR	-99.30	269	-0.369	Picture	PostScript	Text
3' UTR	-245.10	705	-0.348	Picture	PostScript	Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

Orthologous Genes in Other Species

Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.

Mouse	Rat	Zebrafish	D. melanogaster	C. elegans	S. cerevisiae
No ortholog	No ortholog	No ortholog	No ortholog	No ortholog	No ortholog
Gene Details	Gene Details
Gene Sorter	Gene Sorter
	RGD	Ensembl

Descriptions from all associated GenBank mRNAs


	AB385173 - Synthetic construct DNA, clone: pF1KB7007, Homo sapiens C4orf8 gene for C4orf8 protein, complete cds, without stop codon, in Flexi system. AK308449 - Homo sapiens cDNA, FLJ98397. AB000459 - Homo sapiens mRNA, complete cds, clone: RES4-22A. AB000460 - Homo sapiens mRNA, complete cds, clone:RES4-22B. AB000461 - Homo sapiens mRNA, complete cds, clone:RES4-22C. BC136646 - Homo sapiens chromosome 4 open reading frame 8, mRNA (cDNA clone MGC:168259 IMAGE:9020636), complete cds. BC144337 - Homo sapiens cDNA clone IMAGE:9052857. BC144339 - Homo sapiens cDNA clone IMAGE:9052859. BC144340 - Homo sapiens chromosome 4 open reading frame 8, mRNA (cDNA clone MGC:177877 IMAGE:9052860), complete cds. JD389963 - Sequence 370987 from Patent EP1572962. JD125094 - Sequence 106118 from Patent EP1572962. JD054817 - Sequence 35841 from Patent EP1572962. JD494005 - Sequence 475029 from Patent EP1572962. AB001563 - Homo sapiens mRNA for RES4-22D, partial cds. AF040966 - Homo sapiens unknown protein IT14 mRNA, partial cds. AK303732 - Homo sapiens cDNA FLJ51441 partial cds. JD333503 - Sequence 314527 from Patent EP1572962. AK307430 - Homo sapiens cDNA, FLJ97378. JD270359 - Sequence 251383 from Patent EP1572962. JD445396 - Sequence 426420 from Patent EP1572962. JD116519 - Sequence 97543 from Patent EP1572962. JD399285 - Sequence 380309 from Patent EP1572962. JD231859 - Sequence 212883 from Patent EP1572962. JD480729 - Sequence 461753 from Patent EP1572962. JD494255 - Sequence 475279 from Patent EP1572962. JD206488 - Sequence 187512 from Patent EP1572962. JD192954 - Sequence 173978 from Patent EP1572962. JD090640 - Sequence 71664 from Patent EP1572962. JD390945 - Sequence 371969 from Patent EP1572962. JD246271 - Sequence 227295 from Patent EP1572962. JD480268 - Sequence 461292 from Patent EP1572962. JD211432 - Sequence 192456 from Patent EP1572962.

Other Names for This Gene


	Alternate Gene Symbols: A0A1B0GVL4, A0A1B0GVL4_HUMAN, ENST00000637812.1, FAM193A , NM_001366318, uc328efx.1, uc328efx.2 UCSC ID: ENST00000637812.2_10 RefSeq Accession: NM_001366318.2

Gene Model Information


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Methods, Credits, and Use Restrictions


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