The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
SCOP Domains: 47454 - A DNA-binding domain in eukaryotic transcription factors 57959 - Leucine zipper domain
ModBase Predicted Comparative 3D Structure on Q6FG41
Front
Top
Side
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Molecular Function: GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding GO:0001077 transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding GO:0003677 DNA binding GO:0003682 chromatin binding GO:0003690 double-stranded DNA binding GO:0003700 transcription factor activity, sequence-specific DNA binding GO:0005515 protein binding GO:0008134 transcription factor binding GO:0043565 sequence-specific DNA binding GO:0046982 protein heterodimerization activity
Biological Process: GO:0001661 conditioned taste aversion GO:0006355 regulation of transcription, DNA-templated GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0006366 transcription from RNA polymerase II promoter GO:0007399 nervous system development GO:0007565 female pregnancy GO:0007568 aging GO:0009409 response to cold GO:0009416 response to light stimulus GO:0009612 response to mechanical stimulus GO:0009629 response to gravity GO:0009636 response to toxic substance GO:0014070 response to organic cyclic compound GO:0030431 sleep GO:0031668 cellular response to extracellular stimulus GO:0032496 response to lipopolysaccharide GO:0032570 response to progesterone GO:0032870 cellular response to hormone stimulus GO:0034097 response to cytokine GO:0035902 response to immobilization stress GO:0035914 skeletal muscle cell differentiation GO:0035994 response to muscle stretch GO:0042493 response to drug GO:0045672 positive regulation of osteoclast differentiation GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0051412 response to corticosterone GO:0051591 response to cAMP GO:0071277 cellular response to calcium ion GO:1901216 positive regulation of neuron death GO:1902895 positive regulation of pri-miRNA transcription from RNA polymerase II promoter