Human Gene GNAI2 (ENST00000313601.11_4) from GENCODE V47lift37
  Description: G protein subunit alpha i2, transcript variant 1 (from RefSeq NM_002070.4)
Gencode Transcript: ENST00000313601.11_4
Gencode Gene: ENSG00000114353.17_8
Transcript (Including UTRs)
   Position: hg19 chr3:50,273,636-50,296,794 Size: 23,159 Total Exon Count: 9 Strand: +
Coding Region
   Position: hg19 chr3:50,273,768-50,295,122 Size: 21,355 Coding Exon Count: 8 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr3:50,273,636-50,296,794)mRNA (may differ from genome)Protein (355 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedReactome
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: GNAI2_HUMAN
DESCRIPTION: RecName: Full=Guanine nucleotide-binding protein G(i) subunit alpha-2; AltName: Full=Adenylate cyclase-inhibiting G alpha protein;
FUNCTION: Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(i) proteins are involved in hormonal regulation of adenylate cyclase: they inhibit the cyclase in response to beta-adrenergic stimuli. May play a role in cell division.
FUNCTION: Isoform sGi2: Regulates the cell surface density of dopamine receptors DRD2 by sequestrating them as an intracellular pool.
SUBUNIT: G proteins are composed of 3 units; alpha, beta and gamma. The alpha chain contains the guanine nucleotide binding site. Interacts with GPSM1. Interacts with RGS12 and RGS14 (By similarity). Interacts with UNC5B.
INTERACTION: Q99750:MDFI; NbExp=2; IntAct=EBI-353997, EBI-724076;
SUBCELLULAR LOCATION: Cytoplasm. Cytoplasm, cytoskeleton, centrosome. Cell membrane. Note=Localizes in the centrosomes of interphase and mitotic cells. Detected at the cleavage furrow and/or the midbody.
SIMILARITY: Belongs to the G-alpha family. G(i/o/t/z) subfamily.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: GNAI2
Diseases sorted by gene-association score: ventricular tachycardia, idiopathic* (500), granulosa cell tumor of the ovary* (400), pituitary adenoma, acth-secreting* (200), hemiplegic migraine (5)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 168.31 RPKM in Whole Blood
Total median expression: 2474.27 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -77.60132-0.588 Picture PostScript Text
3' UTR -330.901019-0.325 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR001408 - Gprotein_alpha_I
IPR001019 - Gprotein_alpha_su
IPR011025 - GproteinA_insert

Pfam Domains:
PF00025 - ADP-ribosylation factor family
PF00503 - G-protein alpha subunit

SCOP Domains:
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases

ModBase Predicted Comparative 3D Structure on P04899
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGDEnsembl   
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0001664 G-protein coupled receptor binding
GO:0003924 GTPase activity
GO:0004871 signal transducer activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0019001 guanyl nucleotide binding
GO:0031683 G-protein beta/gamma-subunit complex binding
GO:0046872 metal ion binding

Biological Process:
GO:0001973 adenosine receptor signaling pathway
GO:0006457 protein folding
GO:0007049 cell cycle
GO:0007165 signal transduction
GO:0007186 G-protein coupled receptor signaling pathway
GO:0007188 adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007189 adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007193 adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway
GO:0007194 negative regulation of adenylate cyclase activity
GO:0007213 G-protein coupled acetylcholine receptor signaling pathway
GO:0007214 gamma-aminobutyric acid signaling pathway
GO:0007584 response to nutrient
GO:0008283 cell proliferation
GO:0008284 positive regulation of cell proliferation
GO:0030335 positive regulation of cell migration
GO:0032930 positive regulation of superoxide anion generation
GO:0033864 positive regulation of NAD(P)H oxidase activity
GO:0035810 positive regulation of urine volume
GO:0035815 positive regulation of renal sodium excretion
GO:0045955 negative regulation of calcium ion-dependent exocytosis
GO:0046628 positive regulation of insulin receptor signaling pathway
GO:0050805 negative regulation of synaptic transmission
GO:0051301 cell division
GO:0051924 regulation of calcium ion transport
GO:0070374 positive regulation of ERK1 and ERK2 cascade
GO:1903614 negative regulation of protein tyrosine phosphatase activity
GO:1904707 positive regulation of vascular smooth muscle cell proliferation
GO:2000179 positive regulation of neural precursor cell proliferation
GO:2001234 negative regulation of apoptotic signaling pathway

Cellular Component:
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005813 centrosome
GO:0005815 microtubule organizing center
GO:0005829 cytosol
GO:0005834 heterotrimeric G-protein complex
GO:0005856 cytoskeleton
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0030425 dendrite
GO:0030496 midbody
GO:0044297 cell body
GO:0045121 membrane raft
GO:0070062 extracellular exosome
GO:1903561 extracellular vesicle


-  Descriptions from all associated GenBank mRNAs
  AK096595 - Homo sapiens cDNA FLJ39276 fis, clone OCBBF2010843, highly similar to Guanine nucleotide-binding protein G(i), alpha-2 subunit.
BC016995 - Homo sapiens guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2, mRNA (cDNA clone MGC:22031 IMAGE:4403631), complete cds.
AK096299 - Homo sapiens cDNA FLJ38980 fis, clone NT2RI2004884, highly similar to Guanine nucleotide-binding protein G(i), alpha-2 subunit.
AK126708 - Homo sapiens cDNA FLJ44754 fis, clone BRACE3030748, highly similar to Guanine nucleotide-binding protein G(i), alpha-2 subunit.
BC012138 - Homo sapiens guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2, mRNA (cDNA clone MGC:20233 IMAGE:4562585), complete cds.
AK055574 - Homo sapiens cDNA FLJ31012 fis, clone HLUNG2000217, highly similar to Guanine nucleotide-binding protein G(i), alpha-2 subunit.
JD024596 - Sequence 5620 from Patent EP1572962.
BC014627 - Homo sapiens guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2, mRNA (cDNA clone MGC:4489 IMAGE:2963802), complete cds.
X04828 - Human mRNA for G(i) protein alpha-subunit (adenylate cyclase inhibiting GTP-binding protein).
JD030348 - Sequence 11372 from Patent EP1572962.
J03004 - Human guanine nucleotide-binding regulatory protein (G) alpha-inhibitory-subunit mRNA, complete cds.
CR456783 - Homo sapiens full open reading frame cDNA clone RZPDo834G034D for gene GNAI2, guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2; complete cds, incl. stopcodon.
DQ892783 - Synthetic construct clone IMAGE:100005413; FLH189695.01X; RZPDo839A0375D guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 (GNAI2) gene, encodes complete protein.
AB463704 - Synthetic construct DNA, clone: pF1KB6472, Homo sapiens GNAI2 gene for guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2, without stop codon, in Flexi system.
DQ895908 - Synthetic construct Homo sapiens clone IMAGE:100010368; FLH189691.01L; RZPDo839A0365D guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 (GNAI2) gene, encodes complete protein.
KJ905760 - Synthetic construct Homo sapiens clone ccsbBroadEn_15430 GNAI2 gene, encodes complete protein.
CU677075 - Synthetic construct Homo sapiens gateway clone IMAGE:100017082 5' read GNAI2 mRNA.
KJ896898 - Synthetic construct Homo sapiens clone ccsbBroadEn_06292 GNAI2 gene, encodes complete protein.
AF493906 - Homo sapiens guanine nucleotide binding protein alpha i2 (GNAI2) mRNA, complete cds.
AY677118 - Homo sapiens Galphai2 protein mRNA, complete cds, alternatively spliced.
AK304473 - Homo sapiens cDNA FLJ61561 complete cds, highly similar to Guanine nucleotide-binding protein G(i), alpha-2 subunit.
AK302330 - Homo sapiens cDNA FLJ61190 complete cds, highly similar to Guanine nucleotide-binding protein G(i), alpha-2 subunit.
AK131062 - Homo sapiens cDNA FLJ29028 fis, clone RCT00196, highly similar to Guanine nucleotide-binding protein G(i), alpha-2 subunit.
JD024762 - Sequence 5786 from Patent EP1572962.
JD033501 - Sequence 14525 from Patent EP1572962.
JD254502 - Sequence 235526 from Patent EP1572962.
JD549931 - Sequence 530955 from Patent EP1572962.
JD549932 - Sequence 530956 from Patent EP1572962.
JD549933 - Sequence 530957 from Patent EP1572962.
JD193908 - Sequence 174932 from Patent EP1572962.
JD291105 - Sequence 272129 from Patent EP1572962.
JD541011 - Sequence 522035 from Patent EP1572962.
JD472985 - Sequence 454009 from Patent EP1572962.
JD445929 - Sequence 426953 from Patent EP1572962.
JD077299 - Sequence 58323 from Patent EP1572962.
JD191656 - Sequence 172680 from Patent EP1572962.
JD191585 - Sequence 172609 from Patent EP1572962.
JD399524 - Sequence 380548 from Patent EP1572962.
JD124335 - Sequence 105359 from Patent EP1572962.
JD049504 - Sequence 30528 from Patent EP1572962.
JD310608 - Sequence 291632 from Patent EP1572962.
JD143777 - Sequence 124801 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein P04899 (Reactome details) participates in the following event(s):

R-HSA-8850560 G-protein alpha releases G-protein heterotrimer from PDCL
R-HSA-392206 G alpha (i) inhibits adenylate cyclase
R-HSA-392212 G alpha (i) auto-inactivates by hydrolysing GTP to GDP
R-HSA-392202 Dissociation of the P2Y purinoceptor 12:Gi complex
R-HSA-749454 The Ligand:GPCR:Gi complex dissociates
R-HSA-751001 Inactive G alpha (i) reassociates with G beta:gamma
R-HSA-170674 Dissociation of the Gi alpha:G olf complex
R-HSA-167433 G-protein beta-gamma subunits rebind the alpha-GDP subunit
R-HSA-112037 Inactivation of PLC beta
R-HSA-167415 G-protein alpha subunit is inactivated
R-HSA-111870 Activation of PLC beta-1/4
R-HSA-112271 The receptor:G-protein complex dissociates
R-HSA-167429 The receptor:G-protein complex binds GTP
R-HSA-400037 Gi,Go Heterotrimeric G-protein complex dissociates
R-HSA-170671 G alpha-olf:GTP binds to Gi alpha1:GTP:adenylate cyclase complex
R-HSA-170686 Adenylate cyclase increases the GTPase activity of Gi alpha
R-HSA-392187 Activated P2Y purinoceptor 12 binds G-protein Gi
R-HSA-749456 Liganded Gi-activating GPCRs bind inactive heterotrimeric G-protein Gi
R-HSA-167408 The high affinity receptor complex binds to G-protein
R-HSA-167419 The receptor:G-protein complex releases GDP
R-HSA-400092 Alpha-2A,alpha-2C Adrenergic Receptors activate Gi.Go heterotrimeric G proteins
R-HSA-392195 Gi activation by P2Y purinoceptor 12
R-HSA-380073 Liganded Gi-activating GPCR acts as a GEF for Gi
R-HSA-170666 Adenylate cyclase increases the GTPase activity of G alpha-olf
R-HSA-111879 PIP2 hydrolysis
R-HSA-6814122 Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding
R-HSA-170670 Adenylate cyclase inhibitory pathway
R-HSA-418594 G alpha (i) signalling events
R-HSA-392170 ADP signalling through P2Y purinoceptor 12
R-HSA-202040 G-protein activation
R-HSA-112043 PLC beta mediated events
R-HSA-390466 Chaperonin-mediated protein folding
R-HSA-400042 Adrenaline,noradrenaline inhibits insulin secretion
R-HSA-112040 G-protein mediated events
R-HSA-997269 Inhibition of adenylate cyclase pathway
R-HSA-388396 GPCR downstream signalling
R-HSA-392518 Signal amplification
R-HSA-111885 Opioid Signalling
R-HSA-391251 Protein folding
R-HSA-422356 Regulation of insulin secretion
R-HSA-991365 Activation of GABAB receptors
R-HSA-372790 Signaling by GPCR
R-HSA-76002 Platelet activation, signaling and aggregation
R-HSA-392499 Metabolism of proteins
R-HSA-163685 Energy Metabolism
R-HSA-977444 GABA B receptor activation
R-HSA-162582 Signal Transduction
R-HSA-109582 Hemostasis
R-HSA-1430728 Metabolism
R-HSA-977443 GABA receptor activation
R-HSA-112314 Neurotransmitter receptors and postsynaptic signal transmission
R-HSA-112315 Transmission across Chemical Synapses
R-HSA-112316 Neuronal System

-  Other Names for This Gene
  Alternate Gene Symbols: B3KTZ0, B4DYA0, B4E2X5, ENST00000313601.1, ENST00000313601.10, ENST00000313601.2, ENST00000313601.3, ENST00000313601.4, ENST00000313601.5, ENST00000313601.6, ENST00000313601.7, ENST00000313601.8, ENST00000313601.9, GNAI2B, GNAI2_HUMAN, NM_002070, P04899, Q6B6N3, Q8IZ71, uc317plk.1, uc317plk.2
UCSC ID: ENST00000313601.11_4
RefSeq Accession: NM_002070.4
Protein: P04899 (aka GNAI2_HUMAN or GBI2_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.