Human Gene IDE (ENST00000265986.11_9) from GENCODE V47lift37
  Description: insulin degrading enzyme, transcript variant 1 (from RefSeq NM_004969.4)
Gencode Transcript: ENST00000265986.11_9
Gencode Gene: ENSG00000119912.18_12
Transcript (Including UTRs)
   Position: hg19 chr10:94,211,441-94,333,850 Size: 122,410 Total Exon Count: 25 Strand: -
Coding Region
   Position: hg19 chr10:94,214,201-94,333,776 Size: 119,576 Coding Exon Count: 25 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr10:94,211,441-94,333,850)mRNA (may differ from genome)Protein (1019 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedReactome
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: IDE_HUMAN
DESCRIPTION: RecName: Full=Insulin-degrading enzyme; EC=3.4.24.56; AltName: Full=Abeta-degrading protease; AltName: Full=Insulin protease; Short=Insulinase; AltName: Full=Insulysin;
FUNCTION: Plays a role in the cellular breakdown of insulin, IAPP, glucagon, bradykinin, kallidin and other peptides, and thereby plays a role in intercellular peptide signaling. Degrades amyloid formed by APP and IAPP. May play a role in the degradation and clearance of naturally secreted amyloid beta-protein by neurons and microglia.
CATALYTIC ACTIVITY: Degradation of insulin, glucagon and other polypeptides. No action on proteins.
COFACTOR: Binds 1 zinc ion per subunit.
ENZYME REGULATION: Activated by small peptides (By similarity). Activated by ATP and GTP, and to a lesser extent by CTP, TTP and PPPi. Inhibited by bacitracin. Inhibited by S-nitrosylation and oxidation agents.
SUBUNIT: Homodimer. Can form higher oligomers. Interacts (via N- terminus) with varicella-zoster virus (VZV) envelope glycoprotein E (via N-terminus); the membrane-associated isoform may function as an entry receptor for this virus.
SUBCELLULAR LOCATION: Cytoplasm. Cell membrane. Secreted (By similarity). Note=Present at the cell surface of neuron cells. The membrane-associated isoform is approximately 5 kDa larger than the known cytosolic isoform.
DOMAIN: The SlyX motif may be involved in the non-conventional secretion of the protein (By similarity).
PTM: The N-terminus is blocked.
MISCELLANEOUS: ATP-binding induces a conformation change.
SIMILARITY: Belongs to the peptidase M16 family.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: IDE
Diseases sorted by gene-association score: alzheimer disease (12), alzheimer disease-2 (8), diabetes mellitus, noninsulin-dependent (2)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 21.17 RPKM in Skin - Sun Exposed (Lower leg)
Total median expression: 248.90 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -33.9074-0.458 Picture PostScript Text
3' UTR -654.802760-0.237 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011249 - Metalloenz_metal-bd
IPR011237 - Pept_M16_core
IPR011765 - Pept_M16_N
IPR001431 - Pept_M16_Zn_BS
IPR007863 - Peptidase_M16_C

Pfam Domains:
PF00675 - Insulinase (Peptidase family M16)
PF05193 - Peptidase M16 inactive domain
PF16187 - Middle or third domain of peptidase_M16

SCOP Domains:
63411 - LuxS/MPP-like metallohydrolase

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2G47 - X-ray MuPIT 2G48 - X-ray MuPIT 2G49 - X-ray MuPIT 2G54 - X-ray MuPIT 2G56 - X-ray MuPIT 2JBU - X-ray 2JG4 - X-ray MuPIT 2WBY - X-ray MuPIT 2WC0 - X-ray MuPIT 2WK3 - X-ray MuPIT 2YB3 - X-ray 3CWW - X-ray MuPIT 3E4A - X-ray MuPIT 3E4Z - X-ray MuPIT 3E50 - X-ray MuPIT 3H44 - X-ray MuPIT 3HGZ - X-ray MuPIT 3N56 - X-ray MuPIT 3N57 - X-ray MuPIT 3OFI - X-ray MuPIT 3QZ2 - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on P14735
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologGenome BrowserGenome Browser
Gene DetailsGene Details Gene DetailsGene DetailsGene Details
Gene SorterGene Sorter Gene SorterGene SorterGene Sorter
 RGDEnsembl WormBaseSGD
    Protein SequenceProtein Sequence
    AlignmentAlignment

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0001540 beta-amyloid binding
GO:0001618 virus receptor activity
GO:0003824 catalytic activity
GO:0004222 metalloendopeptidase activity
GO:0005102 receptor binding
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008233 peptidase activity
GO:0008237 metallopeptidase activity
GO:0008270 zinc ion binding
GO:0016787 hydrolase activity
GO:0016887 ATPase activity
GO:0017046 peptide hormone binding
GO:0031626 beta-endorphin binding
GO:0042277 peptide binding
GO:0042802 identical protein binding
GO:0042803 protein homodimerization activity
GO:0043559 insulin binding
GO:0046872 metal ion binding

Biological Process:
GO:0006508 proteolysis
GO:0006625 protein targeting to peroxisome
GO:0008152 metabolic process
GO:0008286 insulin receptor signaling pathway
GO:0008340 determination of adult lifespan
GO:0010815 bradykinin catabolic process
GO:0010992 ubiquitin homeostasis
GO:0016032 viral process
GO:0032461 positive regulation of protein oligomerization
GO:0042447 hormone catabolic process
GO:0044257 cellular protein catabolic process
GO:0045732 positive regulation of protein catabolic process
GO:0045861 negative regulation of proteolysis
GO:0046718 viral entry into host cell
GO:0050435 beta-amyloid metabolic process
GO:0051260 protein homooligomerization
GO:0051289 protein homotetramerization
GO:0051291 protein heterooligomerization
GO:0051603 proteolysis involved in cellular protein catabolic process
GO:0097242 beta-amyloid clearance
GO:1901142 insulin metabolic process
GO:1901143 insulin catabolic process

Cellular Component:
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005777 peroxisome
GO:0005782 peroxisomal matrix
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0009986 cell surface
GO:0016020 membrane
GO:0031597 cytosolic proteasome complex


-  Descriptions from all associated GenBank mRNAs
  BX648462 - Homo sapiens mRNA; cDNA DKFZp781M0420 (from clone DKFZp781M0420).
AK302578 - Homo sapiens cDNA FLJ53247 complete cds, highly similar to Insulin-degrading enzyme (EC 3.4.24.56).
AB209204 - Homo sapiens mRNA for insulysin variant protein.
M21188 - Human insulin-degrading enzyme (IDE) mRNA, complete cds.
AK093287 - Homo sapiens cDNA FLJ35968 fis, clone TESTI2013053, highly similar to INSULIN-DEGRADING ENZYME (EC 3.4.24.56).
AX748033 - Sequence 1558 from Patent EP1308459.
AK316407 - Homo sapiens cDNA, FLJ79306 complete cds, highly similar to Insulin-degrading enzyme (EC 3.4.24.56).
BC096336 - Homo sapiens insulin-degrading enzyme, mRNA (cDNA clone MGC:117026 IMAGE:40008464), complete cds.
BC096337 - Homo sapiens insulin-degrading enzyme, mRNA (cDNA clone MGC:117027 IMAGE:40008465), complete cds.
BC096338 - Homo sapiens cDNA clone IMAGE:40008466, containing frame-shift errors.
BC096339 - Homo sapiens insulin-degrading enzyme, mRNA (cDNA clone MGC:117029 IMAGE:40008468), complete cds.
AK312810 - Homo sapiens cDNA, FLJ93240, highly similar to Homo sapiens insulin-degrading enzyme (IDE), mRNA.
KJ891422 - Synthetic construct Homo sapiens clone ccsbBroadEn_00816 IDE gene, encodes complete protein.
AB527891 - Synthetic construct DNA, clone: pF1KB0476, Homo sapiens IDE gene for insulin-degrading enzyme, without stop codon, in Flexi system.
BC036188 - Homo sapiens cDNA clone IMAGE:4825971, containing frame-shift errors.
JD022278 - Sequence 3302 from Patent EP1572962.
JD028645 - Sequence 9669 from Patent EP1572962.
JD087000 - Sequence 68024 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein P14735 (Reactome details) participates in the following event(s):

R-HSA-9033233 PEX5S,L binds cargo proteins containing PTS1
R-HSA-5696872 USP30 deubiquitinates Ub-MOM proteins
R-HSA-9033236 PEX5S,L:Cargo binds PEX13:PEX14 of PEX13:PEX14:PEX2:PEX10:PEX12 (Docking and Translocation Complex)
R-HSA-9033241 Peroxisomal protein import
R-HSA-5689880 Ub-specific processing proteases
R-HSA-392499 Metabolism of proteins
R-HSA-5688426 Deubiquitination
R-HSA-597592 Post-translational protein modification

-  Other Names for This Gene
  Alternate Gene Symbols: B2R721, B7ZAU2, D3DR35, ENST00000265986.1, ENST00000265986.10, ENST00000265986.2, ENST00000265986.3, ENST00000265986.4, ENST00000265986.5, ENST00000265986.6, ENST00000265986.7, ENST00000265986.8, ENST00000265986.9, IDE , IDE_HUMAN, NM_004969, P14735, Q5T5N2, uc317ifl.1, uc317ifl.2
UCSC ID: ENST00000265986.11_9
RefSeq Accession: NM_004969.4
Protein: P14735 (aka IDE_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.