Human Gene KIF23 (ENST00000679126.1_6) from GENCODE V47lift37
  Description: kinesin family member 23, transcript variant 5 (from RefSeq NR_160296.2)
Gencode Transcript: ENST00000679126.1_6
Gencode Gene: ENSG00000137807.16_19
Transcript (Including UTRs)
   Position: hg19 chr15:69,706,688-69,740,764 Size: 34,077 Total Exon Count: 24 Strand: +
Coding Region
   Position: hg19 chr15:69,706,805-69,740,146 Size: 33,342 Coding Exon Count: 24 

Page IndexSequence and LinksPrimersMalaCardsCTDGene Alleles
Microarray ExpressionRNA StructureOther SpeciesmRNA DescriptionsOther NamesModel Information
Methods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr15:69,706,688-69,740,764)mRNA (may differ from genome)Protein (974 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedUniProtKB
WikipediaBioGrid CRISPR DB

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: KIF23
Diseases sorted by gene-association score: dyserythropoietic anemia, congenital, type iii* (450), congenital dyserythropoietic anemia (7)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -47.10117-0.403 Picture PostScript Text
3' UTR -117.70618-0.190 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGD    
      
      

-  Descriptions from all associated GenBank mRNAs
  BC051826 - Homo sapiens kinesin family member 23, mRNA (cDNA clone MGC:60095 IMAGE:6500787), complete cds.
AK308322 - Homo sapiens cDNA, FLJ98270.
FW340007 - Screening.
EU176620 - Synthetic construct Homo sapiens clone IMAGE:100011413; FLH178112.01L; RZPDo839H06254D kinesin family member 23 (KIF23) gene, encodes complete protein.
X67155 - Homo sapiens mRNA for mitotic kinesin-like protein-1 (MKLP-1 gene).
BC017705 - Homo sapiens kinesin family member 23, mRNA (cDNA clone IMAGE:4420248), partial cds.
AK303874 - Homo sapiens cDNA FLJ58416 complete cds, highly similar to Kinesin-like protein KIF23.
AK308361 - Homo sapiens cDNA, FLJ98309.
AK310402 - Homo sapiens cDNA, FLJ17444.
JD307594 - Sequence 288618 from Patent EP1572962.
JD211294 - Sequence 192318 from Patent EP1572962.
JD298398 - Sequence 279422 from Patent EP1572962.
JD307806 - Sequence 288830 from Patent EP1572962.
JD357507 - Sequence 338531 from Patent EP1572962.
JD553637 - Sequence 534661 from Patent EP1572962.
JD551976 - Sequence 533000 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A7I2V5Y5, A0A7I2V5Y5_HUMAN, KIF23 , NR_160296, uc330faw.1, uc330faw.2
UCSC ID: ENST00000679126.1_6
RefSeq Accession: NM_001367805.3

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.