Human Gene MAP2K7 (ENST00000397979.4_8) from GENCODE V47lift37
  Description: mitogen-activated protein kinase kinase 7, transcript variant 3 (from RefSeq NM_145185.4)
Gencode Transcript: ENST00000397979.4_8
Gencode Gene: ENSG00000076984.18_10
Transcript (Including UTRs)
   Position: hg19 chr19:7,968,762-7,979,363 Size: 10,602 Total Exon Count: 11 Strand: +
Coding Region
   Position: hg19 chr19:7,968,830-7,977,316 Size: 8,487 Coding Exon Count: 11 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr19:7,968,762-7,979,363)mRNA (may differ from genome)Protein (419 aa)
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-  Comments and Description Text from UniProtKB
  ID: MP2K7_HUMAN
DESCRIPTION: RecName: Full=Dual specificity mitogen-activated protein kinase kinase 7; Short=MAP kinase kinase 7; Short=MAPKK 7; EC=2.7.12.2; AltName: Full=JNK-activating kinase 2; AltName: Full=MAPK/ERK kinase 7; Short=MEK 7; AltName: Full=Stress-activated protein kinase kinase 4; Short=SAPK kinase 4; Short=SAPKK-4; Short=SAPKK4; AltName: Full=c-Jun N-terminal kinase kinase 2; Short=JNK kinase 2; Short=JNKK 2;
FUNCTION: Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Essential component of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. With MAP2K4/MKK4, is the one of the only known kinase to directly activate the stress-activated protein kinase/c-Jun N-terminal kinases MAPK8/JNK1, MAPK9/JNK2 and MAPK10/JNK3. MAP2K4/MKK4 and MAP2K7/MKK7 both activate the JNKs by phosphorylation, but they differ in their preference for the phosphorylation site in the Thr-Pro-Tyr motif. MAP2K4/MKK4 shows preference for phosphorylation of the Tyr residue and MAP2K7/MKK7 for the Thr residue. The monophosphorylation of JNKs on the Thr residue is sufficient to increase JNK activity indicating that MAP2K7/MKK7 is important to trigger JNK activity, while the additional phosphorylation of the Tyr residue by MAP2K4/MKK4 ensures optimal JNK activation. Has a specific role in JNK signal transduction pathway activated by proinflammatory cytokines. The MKK/JNK signaling pathway is also involved in mitochondrial death signaling pathway, including the release cytochrome c, leading to apoptosis.
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
COFACTOR: Magnesium.
ENZYME REGULATION: Activated by phosphorylation by specific MAP kinase kinase kinases such as MAP3K1/MEKK1, MAP3K3/MEKK3, MAP3K11/MLK3 and MAP3K12/DLK.
SUBUNIT: Interacts with isoform 1 of VRK2. Interacts (via its D domain) with its substrates MAPK8/JNK1, MAPK9/JNK2 and MAPK10/JNK3 (By similarity). Interacts (via its DVD domain) with MAP3Ks activators like MAP3K5/ASK1 and MAP3K1/MEKK1 (By similarity). Interacts with MAPK8IP1/JIP1, MAPK8IP2/JIP2 and MAPK8IP3/JIP3 scafforld proteins.
INTERACTION: P45983:MAPK8; NbExp=3; IntAct=EBI-492627, EBI-286483;
SUBCELLULAR LOCATION: Nucleus. Cytoplasm (By similarity).
TISSUE SPECIFICITY: Ubiquitous; with highest level of expression in skeletal muscle. Isoform 3 is found at low levels in placenta, fetal liver, and skeletal muscle.
DOMAIN: The DVD domain (redidues 377-400) contains a conserved docking site and is found in the mammalian MAP kinase kinases (MAP2Ks). The DVD sites bind to their specific upstream MAP kinase kinase kinases (MAP3Ks) and are essential for activation.
DOMAIN: The D domain (redidues 37-57) contains a conserved docking site and is required for the binding to MAPK substrates.
PTM: Activated by phosphorylation on Ser-271 and Thr-275 by MAP kinase kinase kinases (MAP3Ks) (By similarity).
SIMILARITY: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase subfamily.
SIMILARITY: Contains 1 protein kinase domain.
SEQUENCE CAUTION: Sequence=AAB97813.1; Type=Erroneous termination; Positions=420; Note=Translated as stop; Sequence=AAB97813.1; Type=Frameshift; Positions=402, 410;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: MAP2K7
Diseases sorted by gene-association score: acneiform dermatitis (16), refractory hematologic cancer (8), myasthenic syndrome, congenital, 9, associated with acetylcholine receptor deficiency (8), refractory hairy cell leukemia (7), cervical mucinous adenocarcinoma (6), paronychia (6), acromesomelic dysplasia, maroteaux type (5), integumentary system cancer (5), cardiofaciocutaneous syndrome (5), phencyclidine abuse (4), exanthem (4), appendix adenocarcinoma (4), cell type cancer (2), noonan syndrome 1 (1), gastrointestinal system cancer (1), leukemia, acute myeloid (1)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 25.78 RPKM in Brain - Cerebellum
Total median expression: 791.57 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -30.2068-0.444 Picture PostScript Text
3' UTR -947.202047-0.463 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011009 - Kinase-like_dom
IPR000719 - Prot_kinase_cat_dom
IPR002290 - Ser/Thr_dual-sp_kinase_dom
IPR008271 - Ser/Thr_kinase_AS

Pfam Domains:
PF00069 - Protein kinase domain
PF03109 - ABC1 atypical kinase-like domain
PF07714 - Protein tyrosine and serine/threonine kinase
PF14531 - Kinase-like

SCOP Domains:
56112 - Protein kinase-like (PK-like)

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2DYL - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on O14733
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0000287 magnesium ion binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0004708 MAP kinase kinase activity
GO:0004713 protein tyrosine kinase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016740 transferase activity
GO:0019899 enzyme binding
GO:0019901 protein kinase binding
GO:0019903 protein phosphatase binding
GO:0046872 metal ion binding

Biological Process:
GO:0006468 protein phosphorylation
GO:0006915 apoptotic process
GO:0006970 response to osmotic stress
GO:0007165 signal transduction
GO:0007257 activation of JUN kinase activity
GO:0007346 regulation of mitotic cell cycle
GO:0009408 response to heat
GO:0009411 response to UV
GO:0016310 phosphorylation
GO:0018108 peptidyl-tyrosine phosphorylation
GO:0032212 positive regulation of telomere maintenance via telomerase
GO:0034612 response to tumor necrosis factor
GO:0042981 regulation of apoptotic process
GO:0051403 stress-activated MAPK cascade
GO:0051973 positive regulation of telomerase activity
GO:1904355 positive regulation of telomere capping

Cellular Component:
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol


-  Descriptions from all associated GenBank mRNAs
  BC038295 - Homo sapiens mitogen-activated protein kinase kinase 7, mRNA (cDNA clone MGC:33283 IMAGE:5269063), complete cds.
AK313899 - Homo sapiens cDNA, FLJ94535, Homo sapiens mitogen-activated protein kinase kinase 7 (MAP2K7),transcript variant B, mRNA.
AF013588 - Homo sapiens mitogen-activated protein kinase kinase 7 (MKK7) mRNA, complete cds.
AF013589 - Homo sapiens mitogen-activated protein kinase kinase 7b (MKK7b) mRNA, complete cds.
AF006689 - Homo sapiens MAP kinase kinase Jnkk2 mRNA, complete cds.
AF003199 - Homo sapiens MAP kinase kinase 7 (MKK7) mRNA, partial cds.
AK300988 - Homo sapiens cDNA FLJ53438 complete cds, highly similar to Dual specificity mitogen-activated protein kinase kinase 7 (EC 2.7.12.2).
AF022805 - Homo sapiens c-Jun N-terminal kinase kinase 2 (JNKK2) mRNA, complete cds.
BC005365 - Homo sapiens mitogen-activated protein kinase kinase 7, mRNA (cDNA clone IMAGE:3829438), with apparent retained intron.
JD218761 - Sequence 199785 from Patent EP1572962.
JD483655 - Sequence 464679 from Patent EP1572962.
AB528941 - Synthetic construct DNA, clone: pF1KE0788, Homo sapiens MAP2K7 gene for mitogen-activated protein kinase kinase 7, without stop codon, in Flexi system.
DQ891274 - Synthetic construct clone IMAGE:100003904; FLH170647.01X; RZPDo839H1098D mitogen-activated protein kinase kinase 7 (MAP2K7) gene, encodes complete protein.
DQ894462 - Synthetic construct Homo sapiens clone IMAGE:100008922; FLH170643.01L; RZPDo839H1097D mitogen-activated protein kinase kinase 7 (MAP2K7) gene, encodes complete protein.
KJ905299 - Synthetic construct Homo sapiens clone ccsbBroadEn_14811 MAP2K7 gene, encodes complete protein.
AF014401 - Homo sapiens JNK kinase 2 (JNKK2) mRNA, complete cds.
DQ445915 - Homo sapiens mitogen-activated protein kinase kinase 7 gamma 1 gene, complete cds.
JD335632 - Sequence 316656 from Patent EP1572962.
JD371847 - Sequence 352871 from Patent EP1572962.
JD200453 - Sequence 181477 from Patent EP1572962.
JD156991 - Sequence 138015 from Patent EP1572962.
JD269951 - Sequence 250975 from Patent EP1572962.
AK098807 - Homo sapiens cDNA FLJ25941 fis, clone JTH10246.

-  Biochemical and Signaling Pathways
  BioCarta from NCI Cancer Genome Anatomy Project
h_fcer1Pathway - Fc Epsilon Receptor I Signaling in Mast Cells
h_mapkPathway - MAPKinase Signaling Pathway
h_keratinocytePathway - Keratinocyte Differentiation
h_HivnefPathway - HIV-I Nef: negative effector of Fas and TNF

Reactome (by CSHL, EBI, and GO)

Protein O14733 (Reactome details) participates in the following event(s):

R-HSA-2730868 Phosphorylation of MEK7 by MEKK1
R-HSA-5211387 Anthrax LF cleaves target cell MAP2K7 (MEK7)
R-HSA-450337 Activated TAK1 phosphorylates MKK4/MKK7
R-HSA-168162 Phosphorylation of human JNKs by activated MKK4/MKK7
R-HSA-2871796 FCERI mediated MAPK activation
R-HSA-5210891 Uptake and function of anthrax toxins
R-HSA-450321 JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1
R-HSA-2454202 Fc epsilon receptor (FCERI) signaling
R-HSA-5339562 Uptake and actions of bacterial toxins
R-HSA-450294 MAP kinase activation
R-HSA-168249 Innate Immune System
R-HSA-5663205 Infectious disease
R-HSA-2559580 Oxidative Stress Induced Senescence
R-HSA-166058 MyD88:Mal cascade initiated on plasma membrane
R-HSA-168164 Toll Like Receptor 3 (TLR3) Cascade
R-HSA-448424 Interleukin-17 signaling
R-HSA-937061 TRIF(TICAM1)-mediated TLR4 signaling
R-HSA-975138 TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
R-HSA-975871 MyD88 cascade initiated on plasma membrane
R-HSA-168256 Immune System
R-HSA-1643685 Disease
R-HSA-2559583 Cellular Senescence
R-HSA-166016 Toll Like Receptor 4 (TLR4) Cascade
R-HSA-168179 Toll Like Receptor TLR1:TLR2 Cascade
R-HSA-168188 Toll Like Receptor TLR6:TLR2 Cascade
R-HSA-168898 Toll-Like Receptors Cascades
R-HSA-449147 Signaling by Interleukins
R-HSA-166166 MyD88-independent TLR4 cascade
R-HSA-975155 MyD88 dependent cascade initiated on endosome
R-HSA-168142 Toll Like Receptor 10 (TLR10) Cascade
R-HSA-168176 Toll Like Receptor 5 (TLR5) Cascade
R-HSA-2262752 Cellular responses to stress
R-HSA-181438 Toll Like Receptor 2 (TLR2) Cascade
R-HSA-1280215 Cytokine Signaling in Immune system
R-HSA-168138 Toll Like Receptor 9 (TLR9) Cascade
R-HSA-168181 Toll Like Receptor 7/8 (TLR7/8) Cascade
R-HSA-8953897 Cellular responses to external stimuli

-  Other Names for This Gene
  Alternate Gene Symbols: B2R9S5, D6W659, ENST00000397979.1, ENST00000397979.2, ENST00000397979.3, JNKK2, MEK7, MKK7, MP2K7_HUMAN, NM_145185, O14648, O14733, O14816, O60452, O60453, PRKMK7, Q1PG43, Q8IY10, SKK4, uc318zkp.1, uc318zkp.2
UCSC ID: ENST00000397979.4_8
RefSeq Accession: NM_145185.4
Protein: O14733 (aka MP2K7_HUMAN or MPK7_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.