Human Gene MAP3K10 (ENST00000253055.8_4) from GENCODE V47lift37
  Description: mitogen-activated protein kinase kinase kinase 10 (from RefSeq NM_002446.4)
Gencode Transcript: ENST00000253055.8_4
Gencode Gene: ENSG00000130758.8_10
Transcript (Including UTRs)
   Position: hg19 chr19:40,697,333-40,721,482 Size: 24,150 Total Exon Count: 10 Strand: +
Coding Region
   Position: hg19 chr19:40,697,939-40,721,199 Size: 23,261 Coding Exon Count: 10 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDGene Alleles
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr19:40,697,333-40,721,482)mRNA (may differ from genome)Protein (954 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMGIOMIMPubMedUniProtKBWikipedia
BioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: M3K10_HUMAN
DESCRIPTION: RecName: Full=Mitogen-activated protein kinase kinase kinase 10; EC=2.7.11.25; AltName: Full=Mixed lineage kinase 2; AltName: Full=Protein kinase MST;
FUNCTION: Activates the JUN N-terminal pathway (By similarity).
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
COFACTOR: Magnesium (By similarity).
ENZYME REGULATION: Homodimerization via the leucine zipper domains is required for autophosphorylation and subsequent activation (By similarity).
SUBUNIT: Homodimer (By similarity).
TISSUE SPECIFICITY: Expressed in brain and skeletal muscle.
PTM: Autophosphorylation on serine and threonine residues within the activation loop plays a role in enzyme activation (By similarity).
SIMILARITY: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
SIMILARITY: Contains 1 protein kinase domain.
SIMILARITY: Contains 1 SH3 domain.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 60.23 RPKM in Brain - Cortex
Total median expression: 736.18 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -356.90606-0.589 Picture PostScript Text
3' UTR -128.30283-0.453 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011009 - Kinase-like_dom
IPR016231 - MAPKKK9/10/11
IPR015785 - MAPKKK9/10/11-like
IPR000719 - Prot_kinase_cat_dom
IPR017441 - Protein_kinase_ATP_BS
IPR001245 - Ser-Thr/Tyr_kinase_cat_dom
IPR008271 - Ser/Thr_kinase_AS
IPR011511 - SH3_2
IPR001452 - SH3_domain

Pfam Domains:
PF00018 - SH3 domain
PF00069 - Protein kinase domain
PF07653 - Variant SH3 domain
PF07714 - Protein tyrosine and serine/threonine kinase
PF14604 - Variant SH3 domain

SCOP Domains:
50044 - SH3-domain
56112 - Protein kinase-like (PK-like)

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2RF0 - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on Q02779
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0003714 transcription corepressor activity
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0004706 JUN kinase kinase kinase activity
GO:0004709 MAP kinase kinase kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016740 transferase activity
GO:0042803 protein homodimerization activity
GO:0043425 bHLH transcription factor binding

Biological Process:
GO:0000186 activation of MAPKK activity
GO:0006468 protein phosphorylation
GO:0006915 apoptotic process
GO:0007165 signal transduction
GO:0007224 smoothened signaling pathway
GO:0007254 JNK cascade
GO:0007256 activation of JNKK activity
GO:0007257 activation of JUN kinase activity
GO:0008219 cell death
GO:0016310 phosphorylation
GO:0018105 peptidyl-serine phosphorylation
GO:0018107 peptidyl-threonine phosphorylation
GO:0043065 positive regulation of apoptotic process
GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity
GO:0043507 positive regulation of JUN kinase activity
GO:0045892 negative regulation of transcription, DNA-templated
GO:0046330 positive regulation of JNK cascade
GO:0046777 protein autophosphorylation

Cellular Component:
GO:0005737 cytoplasm


-  Descriptions from all associated GenBank mRNAs
  X90846 - H.sapiens mRNA for mixed lineage kinase 2.
JD210895 - Sequence 191919 from Patent EP1572962.
JD190624 - Sequence 171648 from Patent EP1572962.
Z48615 - H.sapiens MST mRNA for serine/threonine kinase.
JD217415 - Sequence 198439 from Patent EP1572962.
JD415911 - Sequence 396935 from Patent EP1572962.
JD389218 - Sequence 370242 from Patent EP1572962.
JD124208 - Sequence 105232 from Patent EP1572962.
JD122773 - Sequence 103797 from Patent EP1572962.
JD119598 - Sequence 100622 from Patent EP1572962.
BC111460 - Synthetic construct Homo sapiens clone IMAGE:40080650, MGC:133438 MAP3K10 protein (MAP3K10) mRNA, encodes complete protein.
JD134967 - Sequence 115991 from Patent EP1572962.
JD191876 - Sequence 172900 from Patent EP1572962.
JD096951 - Sequence 77975 from Patent EP1572962.
JD108339 - Sequence 89363 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  BioCarta from NCI Cancer Genome Anatomy Project
h_mapkPathway - MAPKinase Signaling Pathway

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000253055.1, ENST00000253055.2, ENST00000253055.3, ENST00000253055.4, ENST00000253055.5, ENST00000253055.6, ENST00000253055.7, M3K10_HUMAN, MLK2, MST, NM_002446, Q02779, Q12761, Q14871, uc317fjy.1, uc317fjy.2
UCSC ID: ENST00000253055.8_4
RefSeq Accession: NM_002446.4
Protein: Q02779 (aka M3K10_HUMAN or M3KA_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.