Human Gene MAP3K8 (ENST00000263056.6_4) from GENCODE V47lift37
  Description: mitogen-activated protein kinase kinase kinase 8, transcript variant 1 (from RefSeq NM_005204.4)
Gencode Transcript: ENST00000263056.6_4
Gencode Gene: ENSG00000107968.10_7
Transcript (Including UTRs)
   Position: hg19 chr10:30,723,113-30,750,762 Size: 27,650 Total Exon Count: 9 Strand: +
Coding Region
   Position: hg19 chr10:30,727,868-30,749,765 Size: 21,898 Coding Exon Count: 7 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr10:30,723,113-30,750,762)mRNA (may differ from genome)Protein (467 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedReactome
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: M3K8_HUMAN
DESCRIPTION: RecName: Full=Mitogen-activated protein kinase kinase kinase 8; EC=2.7.11.25; AltName: Full=Cancer Osaka thyroid oncogene; AltName: Full=Proto-oncogene c-Cot; AltName: Full=Serine/threonine-protein kinase cot; AltName: Full=Tumor progression locus 2; Short=TPL-2;
FUNCTION: Required for TLR4 activation of the MEK/ERK pathway. Able to activate NF-kappa-B 1 by stimulating proteasome-mediated proteolysis of NF-kappa-B 1/p105. Plays a role in the cell cycle. The longer form has some transforming activity, although it is much weaker than the activated cot oncoprotein.
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
COFACTOR: Magnesium.
SUBUNIT: Forms a ternary complex with NFKB1 and TNIP2.
INTERACTION: Q8NFZ5:TNIP2; NbExp=8; IntAct=EBI-354900, EBI-359372;
SUBCELLULAR LOCATION: Cytoplasm.
TISSUE SPECIFICITY: Expressed in several normal tissues and human tumor-derived cell lines.
DEVELOPMENTAL STAGE: Isoform 1 is activated specifically during the S and G2/M phases of the cell cycle.
PTM: Autophosphorylated. Isoform 1 undergoes phosphorylation mainly on Ser residues, and isoform 2 on both Ser and Thr residues.
SIMILARITY: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
SIMILARITY: Contains 1 protein kinase domain.
WEB RESOURCE: Name=SeattleSNPs; URL="http://pga.gs.washington.edu/data/map3k8/";

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: MAP3K8
Diseases sorted by gene-association score: lung cancer* (137), steroid-induced glaucoma (6)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 23.59 RPKM in Adipose - Visceral (Omentum)
Total median expression: 354.29 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -162.90449-0.363 Picture PostScript Text
3' UTR -243.30997-0.244 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011009 - Kinase-like_dom
IPR017424 - MAPKKK8
IPR000719 - Prot_kinase_cat_dom
IPR008271 - Ser/Thr_kinase_AS

Pfam Domains:
PF00069 - Protein kinase domain
PF07714 - Protein tyrosine and serine/threonine kinase

SCOP Domains:
56112 - Protein kinase-like (PK-like)

ModBase Predicted Comparative 3D Structure on P41279
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0000287 magnesium ion binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0004709 MAP kinase kinase kinase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016740 transferase activity
GO:0046872 metal ion binding

Biological Process:
GO:0000186 activation of MAPKK activity
GO:0002376 immune system process
GO:0006468 protein phosphorylation
GO:0007049 cell cycle
GO:0007165 signal transduction
GO:0007346 regulation of mitotic cell cycle
GO:0016310 phosphorylation
GO:0023014 signal transduction by protein phosphorylation
GO:0031098 stress-activated protein kinase signaling cascade
GO:0031295 T cell costimulation
GO:0032147 activation of protein kinase activity
GO:0042981 regulation of apoptotic process
GO:0051403 stress-activated MAPK cascade
GO:0070498 interleukin-1-mediated signaling pathway

Cellular Component:
GO:0005737 cytoplasm
GO:0005829 cytosol


-  Descriptions from all associated GenBank mRNAs
  AK313295 - Homo sapiens cDNA, FLJ93807, highly similar to Homo sapiens mitogen-activated protein kinase kinase kinase 8 (MAP3K8), mRNA.
AK290320 - Homo sapiens cDNA FLJ78064 complete cds, highly similar to Human mRNA for proto-oncogene protein.
DL492441 - Novel nucleic acids.
DL490920 - Novel nucleic acids.
JD200360 - Sequence 181384 from Patent EP1572962.
D14497 - Homo sapiens mRNA for proto-oncogene protein, complete cds.
JD334680 - Sequence 315704 from Patent EP1572962.
AB209539 - Homo sapiens mRNA for mitogen-activated protein kinase kinase kinase 8 variant protein.
BC104833 - Homo sapiens mitogen-activated protein kinase kinase kinase 8, mRNA (cDNA clone MGC:132493 IMAGE:8143836), complete cds.
BC113566 - Homo sapiens mitogen-activated protein kinase kinase kinase 8, mRNA (cDNA clone MGC:142126 IMAGE:8322618), complete cds.
JD236685 - Sequence 217709 from Patent EP1572962.
JD524513 - Sequence 505537 from Patent EP1572962.
JD504272 - Sequence 485296 from Patent EP1572962.
JD563184 - Sequence 544208 from Patent EP1572962.
JD354224 - Sequence 335248 from Patent EP1572962.
JD270825 - Sequence 251849 from Patent EP1572962.
JD392418 - Sequence 373442 from Patent EP1572962.
JD133810 - Sequence 114834 from Patent EP1572962.
Z14138 - H.sapiens (Ewing's sarcoma cell line) mRNA encoding open reading frame.
JD266200 - Sequence 247224 from Patent EP1572962.
JD067135 - Sequence 48159 from Patent EP1572962.
JD040274 - Sequence 21298 from Patent EP1572962.
AB527866 - Synthetic construct DNA, clone: pF1KB0411, Homo sapiens MAP3K8 gene for mitogen-activated protein kinase kinase kinase 8, without stop codon, in Flexi system.
CR542284 - Homo sapiens full open reading frame cDNA clone RZPDo834G1126D for gene MAP3K8, mitogen-activated protein kinase kinase kinase 8; complete cds, without stopcodon.
HQ258255 - Synthetic construct Homo sapiens clone IMAGE:100072564 mitogen-activated protein kinase kinase kinase 8 (MAP3K8) (MAP3K8) gene, encodes complete protein.
KJ890954 - Synthetic construct Homo sapiens clone ccsbBroadEn_00348 MAP3K8 gene, encodes complete protein.
JD317379 - Sequence 298403 from Patent EP1572962.
JD091907 - Sequence 72931 from Patent EP1572962.
JD352819 - Sequence 333843 from Patent EP1572962.
JD472706 - Sequence 453730 from Patent EP1572962.
JD454205 - Sequence 435229 from Patent EP1572962.
JD372633 - Sequence 353657 from Patent EP1572962.
JD044580 - Sequence 25604 from Patent EP1572962.
JD509265 - Sequence 490289 from Patent EP1572962.
JD310088 - Sequence 291112 from Patent EP1572962.
JD098939 - Sequence 79963 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  BioCarta from NCI Cancer Genome Anatomy Project
h_mapkPathway - MAPKinase Signaling Pathway

Reactome (by CSHL, EBI, and GO)

Protein P41279 (Reactome details) participates in the following event(s):

R-HSA-389756 AKT interacts and phosphorylates Cot
R-HSA-451634 NFKB p105, TPL2 (COT) and ABIN2 form a stable complex
R-HSA-5684261 MAP3K8 is phosphorylated
R-HSA-5684267 IKBKB phosphorylates NFkB p105 within the NFkB p105:TPL2:ABIN2 complex
R-HSA-5684275 IKBKB phosphorylates TPL2 (MAP3K8) at Ser400
R-HSA-5684250 SCF betaTrCP ubiquitinates NFKB p105 within p-S927, S932-NFkB p105:TPL2:ABIN2
R-HSA-392530 p-S400-Cot phosphorylates NIK
R-HSA-5684248 SCF betaTrCP1,2 binds p-NFkB p105:TPL2:ABIN2
R-HSA-451649 TPL2 phosphorylates MEK1, SEK1
R-HSA-389357 CD28 dependent PI3K/Akt signaling
R-HSA-5684264 MAP3K8 (TPL2)-dependent MAPK1/3 activation
R-HSA-389356 CD28 co-stimulation
R-HSA-450294 MAP kinase activation
R-HSA-9020702 Interleukin-1 signaling
R-HSA-388841 Costimulation by the CD28 family
R-HSA-166058 MyD88:Mal cascade initiated on plasma membrane
R-HSA-168164 Toll Like Receptor 3 (TLR3) Cascade
R-HSA-448424 Interleukin-17 signaling
R-HSA-937061 TRIF(TICAM1)-mediated TLR4 signaling
R-HSA-975138 TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
R-HSA-975871 MyD88 cascade initiated on plasma membrane
R-HSA-446652 Interleukin-1 family signaling
R-HSA-1280218 Adaptive Immune System
R-HSA-166016 Toll Like Receptor 4 (TLR4) Cascade
R-HSA-168179 Toll Like Receptor TLR1:TLR2 Cascade
R-HSA-168188 Toll Like Receptor TLR6:TLR2 Cascade
R-HSA-168898 Toll-Like Receptors Cascades
R-HSA-449147 Signaling by Interleukins
R-HSA-166166 MyD88-independent TLR4 cascade
R-HSA-975155 MyD88 dependent cascade initiated on endosome
R-HSA-168142 Toll Like Receptor 10 (TLR10) Cascade
R-HSA-168176 Toll Like Receptor 5 (TLR5) Cascade
R-HSA-168256 Immune System
R-HSA-181438 Toll Like Receptor 2 (TLR2) Cascade
R-HSA-168249 Innate Immune System
R-HSA-1280215 Cytokine Signaling in Immune system
R-HSA-168138 Toll Like Receptor 9 (TLR9) Cascade
R-HSA-168181 Toll Like Receptor 7/8 (TLR7/8) Cascade

-  Other Names for This Gene
  Alternate Gene Symbols: A8K2Q5, COT, D3DRX1, ENST00000263056.1, ENST00000263056.2, ENST00000263056.3, ENST00000263056.4, ENST00000263056.5, ESTF, M3K8_HUMAN, NM_005204, P41279, Q14275, Q5T855, Q9HC81, uc317hgb.1, uc317hgb.2
UCSC ID: ENST00000263056.6_4
RefSeq Accession: NM_005204.4
Protein: P41279 (aka M3K8_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.