Human Gene MAPK8IP1 (ENST00000241014.6_10) from GENCODE V47lift37
  Description: mitogen-activated protein kinase 8 interacting protein 1 (from RefSeq NM_005456.4)
Gencode Transcript: ENST00000241014.6_10
Gencode Gene: ENSG00000121653.11_12
Transcript (Including UTRs)
   Position: hg19 chr11:45,907,202-45,928,016 Size: 20,815 Total Exon Count: 12 Strand: +
Coding Region
   Position: hg19 chr11:45,907,372-45,927,272 Size: 19,901 Coding Exon Count: 12 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr11:45,907,202-45,928,016)mRNA (may differ from genome)Protein (711 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedUniProtKB
WikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: JIP1_HUMAN
DESCRIPTION: RecName: Full=C-Jun-amino-terminal kinase-interacting protein 1; Short=JIP-1; Short=JNK-interacting protein 1; AltName: Full=Islet-brain 1; Short=IB-1; AltName: Full=JNK MAP kinase scaffold protein 1; AltName: Full=Mitogen-activated protein kinase 8-interacting protein 1;
FUNCTION: The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. Required for JNK activation in response to excitotoxic stress. Cytoplasmic MAPK8IP1 causes inhibition of JNK- regulated activity by retaining JNK in the cytoplasm and inhibiting JNK phosphorylation of c-Jun. May also participate in ApoER2-specific reelin signaling. Directly, or indirectly, regulates GLUT2 gene expression and beta-cell function. Appears to have a role in cell signaling in mature and developing nerve terminals. May function as a regulator of vesicle transport, through interactions with the JNK-signaling components and motor proteins (By similarity). Functions as an anti-apoptotic protein and whose level seems to influence the beta-cell death or survival response.
SUBUNIT: Forms homo- or heterooligomeric complexes. Binds specific components of the JNK signaling pathway namely, MAPK8, MAPK9, MAPK10, MAPKK7, MLK2, MLK3, MAP3K12 and MAP3K13. Also binds the proline-rich domain-containing splice variant of apolipoprotein E receptor 2 (ApoER2). Interacts, via the PID domain, with ARHGEF28. Binds the cytoplasmic tails of LRP1 and LRP2 (Megalin). Binds the TPR motif-containing C-terminal of KNS2, then the pre-assembled MAPK8IP1 scaffolding complexes are transported as a cargo of kinesin, to the required subcellular location. Interacts with the cytoplasmic domain of APP. Interacts with DCLK2 (By similarity). Interacts with MAP3K7. Interacts with isoform 1 and isoform 2 of VRK2.
INTERACTION: P05067:APP; NbExp=4; IntAct=EBI-78404, EBI-77613; P12023:App (xeno); NbExp=2; IntAct=EBI-78404, EBI-78814; O43318:MAP3K7; NbExp=10; IntAct=EBI-78404, EBI-358684;
SUBCELLULAR LOCATION: Cytoplasm (By similarity). Cytoplasm, perinuclear region (By similarity). Nucleus (By similarity). Endoplasmic reticulum membrane. Mitochondrion membrane. Note=Accumulates in cell surface projections. Under certain stress conditions, translocates to the perinuclear region of neurons. In insulin-secreting cells, detected in both the cytoplasm and nucleus (By similarity).
TISSUE SPECIFICITY: Highly expressed in brain. Expressed in neurons, localizing to neurite tips in differentiating cells. Also expressed in the pancreas, testis and prostate. Low levels in heart, ovary and small intestine. Decreased levels in pancreatic beta cells sensitize cells to IL-1-beta-induced apoptosis.
DOMAIN: The destruction boxes (D-box) may act as recognition signals for degradation via the ubiquitin-proteasome pathway.
DOMAIN: A minimal inhibitory domain prevents pancreatic beta cell apoptosis in vitro, and prevents activation of c-jun by MAPK8, MAPK9 and MAPK10.
DOMAIN: The SH3 domain mediates homodimerization (By similarity).
PTM: Phosphorylated by MAPK8, MAPK9 and MAPK10. Phosphorylation on Thr-103 is also necessary for the dissociation and activation of MAP3K12. Phosphorylated by isoform 1 and isoform 2 of VRK2.
PTM: Ubiquitinated. Two preliminary events are required to prime for ubiquitination; phosphorylation and an increased in intracellular calcium concentration. Then, the calcium influx initiates ubiquitination and degradation by the ubiquitin- proteasome pathway.
DISEASE: Defects in MAPK8IP1 are a cause of non-insulin-dependent diabetes mellitus (NIDDM) [MIM:125853]. NIDDM is characterized by an autosomal dominant mode of inheritance, onset during adulthood and insulin resistance.
MISCELLANEOUS: A chemically synthesized cell-permeable peptide of the minimal inhibitory domain decreases brain lesions in both transient and permanent ischemia. The level of protection is still high when administered 6 or 12 hours after ischemia.
SIMILARITY: Belongs to the JIP scaffold family.
SIMILARITY: Contains 1 PID domain.
SIMILARITY: Contains 1 SH3 domain.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: MAPK8IP1
Diseases sorted by gene-association score: diabetes mellitus, noninsulin-dependent* (722), sarcomatoid squamous cell skin carcinoma (15), fallopian tube adenocarcinoma (14), cervix small cell carcinoma (11), hemometra (9), cervical carcinosarcoma (9), ophthalmia neonatorum (8), female reproductive organ cancer (8), endocervical carcinoma (8), cervix carcinoma (8), vaginal cancer (8), radiation cystitis (7), lymphocele (7), reproductive organ cancer (6), cardiomyopathy, hypertrophic, 2 (5), low compliance bladder (5), dysgerminoma of ovary (4)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 138.85 RPKM in Nerve - Tibial
Total median expression: 1608.44 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -83.70170-0.492 Picture PostScript Text
3' UTR -336.60744-0.452 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011993 - PH_like_dom
IPR006020 - PTyr_interaction_dom
IPR001452 - SH3_domain

Pfam Domains:
PF00018 - SH3 domain
PF00640 - Phosphotyrosine interaction domain (PTB/PID)
PF14604 - Variant SH3 domain

SCOP Domains:
50044 - SH3-domain
50729 - PH domain-like

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2G01 - X-ray MuPIT 2GMX - X-ray MuPIT 2H96 - X-ray MuPIT 3OXI - X-ray MuPIT 3PTG - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on Q9UQF2
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details Gene Details  
Gene SorterGene Sorter Gene Sorter  
 RGD    
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0004860 protein kinase inhibitor activity
GO:0005078 MAP-kinase scaffold activity
GO:0005515 protein binding
GO:0008432 JUN kinase binding
GO:0019894 kinesin binding
GO:0019901 protein kinase binding
GO:0031434 mitogen-activated protein kinase kinase binding
GO:0031435 mitogen-activated protein kinase kinase kinase binding

Biological Process:
GO:0006355 regulation of transcription, DNA-templated
GO:0007165 signal transduction
GO:0007258 JUN phosphorylation
GO:0016192 vesicle-mediated transport
GO:0043066 negative regulation of apoptotic process
GO:0043410 positive regulation of MAPK cascade
GO:0043508 negative regulation of JUN kinase activity
GO:0046328 regulation of JNK cascade
GO:0046329 negative regulation of JNK cascade
GO:2001243 negative regulation of intrinsic apoptotic signaling pathway

Cellular Component:
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0030424 axon
GO:0030425 dendrite
GO:0031966 mitochondrial membrane
GO:0043005 neuron projection
GO:0044294 dendritic growth cone
GO:0044295 axonal growth cone
GO:0044297 cell body
GO:0044302 dentate gyrus mossy fiber
GO:0045202 synapse
GO:0048471 perinuclear region of cytoplasm


-  Descriptions from all associated GenBank mRNAs
  JD079738 - Sequence 60762 from Patent EP1572962.
BC068470 - Homo sapiens mitogen-activated protein kinase 8 interacting protein 1, mRNA (cDNA clone MGC:87090 IMAGE:5260971), complete cds.
BC035920 - Homo sapiens cDNA clone IMAGE:5164046, containing frame-shift errors.
KJ898030 - Synthetic construct Homo sapiens clone ccsbBroadEn_07424 MAPK8IP1 gene, encodes complete protein.
AF074091 - Homo sapiens islet-brain 1 mRNA, complete cds.
AK293637 - Homo sapiens cDNA FLJ53883 complete cds, highly similar to C-jun-amino-terminal kinase-interacting protein 1.
JD205850 - Sequence 186874 from Patent EP1572962.
JD476000 - Sequence 457024 from Patent EP1572962.
JD143202 - Sequence 124226 from Patent EP1572962.
JD343743 - Sequence 324767 from Patent EP1572962.
AK295942 - Homo sapiens cDNA FLJ61291 complete cds, highly similar to C-jun-amino-terminal kinase-interactingprotein 1.
AB209720 - Homo sapiens mRNA for mitogen-activated protein kinase 8 interacting protein 1 variant protein.
AF007134 - Homo sapiens clone 23565 unknown mRNA, partial cds.
JD345370 - Sequence 326394 from Patent EP1572962.
JD143182 - Sequence 124206 from Patent EP1572962.
JD147566 - Sequence 128590 from Patent EP1572962.
JD455208 - Sequence 436232 from Patent EP1572962.
JD263907 - Sequence 244931 from Patent EP1572962.
JD128607 - Sequence 109631 from Patent EP1572962.
JD457643 - Sequence 438667 from Patent EP1572962.
JD277535 - Sequence 258559 from Patent EP1572962.
JD278768 - Sequence 259792 from Patent EP1572962.
JD259623 - Sequence 240647 from Patent EP1572962.
JD518374 - Sequence 499398 from Patent EP1572962.
JD450908 - Sequence 431932 from Patent EP1572962.
JD192186 - Sequence 173210 from Patent EP1572962.
JD547471 - Sequence 528495 from Patent EP1572962.
JD443291 - Sequence 424315 from Patent EP1572962.
JD169858 - Sequence 150882 from Patent EP1572962.
JD080933 - Sequence 61957 from Patent EP1572962.
JD165033 - Sequence 146057 from Patent EP1572962.
JD165032 - Sequence 146056 from Patent EP1572962.
JD068020 - Sequence 49044 from Patent EP1572962.
JD102608 - Sequence 83632 from Patent EP1572962.
JD445531 - Sequence 426555 from Patent EP1572962.
JD401061 - Sequence 382085 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: D3DQP4, ENST00000241014.1, ENST00000241014.2, ENST00000241014.3, ENST00000241014.4, ENST00000241014.5, IB1, JIP1, JIP1_HUMAN, NM_005456, O43407, PRKM8IP, Q9UQF2, uc317eig.1, uc317eig.2
UCSC ID: ENST00000241014.6_10
RefSeq Accession: NM_005456.4
Protein: Q9UQF2 (aka JIP1_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.