Human Gene MAPK8IP3 (ENST00000610761.2_9) from GENCODE V47lift37
  Description: mitogen-activated protein kinase 8 interacting protein 3, transcript variant 3 (from RefSeq NM_001318852.2)
Gencode Transcript: ENST00000610761.2_9
Gencode Gene: ENSG00000138834.15_17
Transcript (Including UTRs)
   Position: hg19 chr16:1,756,196-1,820,352 Size: 64,157 Total Exon Count: 32 Strand: +
Coding Region
   Position: hg19 chr16:1,756,341-1,818,825 Size: 62,485 Coding Exon Count: 32 

Page IndexSequence and LinksPrimersCTDGene AllelesMicroarray Expression
RNA StructureOther SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:1,756,196-1,820,352)mRNA (may differ from genome)Protein (1337 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMGIOMIMPubMedUniProtKBWikipedia
BioGrid CRISPR DB

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
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+  Microarray Expression Data
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -80.40145-0.554 Picture PostScript Text
3' UTR -709.401527-0.465 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Descriptions from all associated GenBank mRNAs
  AB621811 - Homo sapiens MAPK8IP3 mRNA for C-Jun-amino-terminal kinase-interacting protein 3, complete cds, clone: HP07210-RBd17B03.
AB028989 - Homo sapiens KIAA1066 mRNA for KIAA1066 protein.
BC150266 - Homo sapiens mitogen-activated protein kinase 8 interacting protein 3, mRNA (cDNA clone MGC:166852 IMAGE:9007222), complete cds.
AK024437 - Homo sapiens mRNA for FLJ00027 protein, partial cds.
JD193997 - Sequence 175021 from Patent EP1572962.
BC137123 - Homo sapiens mitogen-activated protein kinase 8 interacting protein 3, mRNA (cDNA clone MGC:168743 IMAGE:9021120), complete cds.
BC137124 - Homo sapiens mitogen-activated protein kinase 8 interacting protein 3, mRNA (cDNA clone MGC:168744 IMAGE:9021121), complete cds.
BC144486 - Homo sapiens mitogen-activated protein kinase 8 interacting protein 3, mRNA (cDNA clone MGC:178030 IMAGE:9053013), complete cds.
AB384099 - Synthetic construct DNA, clone: pF1KSDA1066, Homo sapiens MAPK8IP3 gene for mitogen-activated protein kinase 8 interacting protein 3, complete cds, without stop codon, in Flexi system.
KJ898452 - Synthetic construct Homo sapiens clone ccsbBroadEn_07846 MAPK8IP3 gene, encodes complete protein.
CR749696 - Homo sapiens mRNA; cDNA DKFZp762N1113 (from clone DKFZp762N1113).
JD117597 - Sequence 98621 from Patent EP1572962.
JD477639 - Sequence 458663 from Patent EP1572962.
BC087861 - Homo sapiens cDNA clone IMAGE:30383730.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A087WYG2, A0A087WYG2_HUMAN, ENST00000610761.1, MAPK8IP3 , NM_001318852, uc327myg.1, uc327myg.2
UCSC ID: ENST00000610761.2_9
RefSeq Accession: NM_001318852.2

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.