Human Gene MAST2 (ENST00000361297.7_8) from GENCODE V47lift37
  Description: microtubule associated serine/threonine kinase 2, transcript variant 1 (from RefSeq NM_015112.3)
Gencode Transcript: ENST00000361297.7_8
Gencode Gene: ENSG00000086015.23_14
Transcript (Including UTRs)
   Position: hg19 chr1:46,269,284-46,501,794 Size: 232,511 Total Exon Count: 29 Strand: +
Coding Region
   Position: hg19 chr1:46,269,568-46,501,738 Size: 232,171 Coding Exon Count: 29 

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Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:46,269,284-46,501,794)mRNA (may differ from genome)Protein (1798 aa)
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-  Comments and Description Text from UniProtKB
  ID: MAST2_HUMAN
DESCRIPTION: RecName: Full=Microtubule-associated serine/threonine-protein kinase 2; EC=2.7.11.1;
FUNCTION: Appears to link the dystrophin/utrophin network with microtubule filaments via the syntrophins. Phosphorylation of DMD or UTRN may modulate their affinities for associated proteins. Functions in a multi-protein complex in spermatid maturation. Regulates lipopolysaccharide-induced IL-12 synthesis in macrophages by forming a complex with TRAF6, resulting in the inhibition of TRAF6 NF-kappa-B activation (By similarity).
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
COFACTOR: Magnesium (By similarity).
SUBUNIT: Interacts with CDHR2.
INTERACTION: Q9BYE9:CDHR2; NbExp=4; IntAct=EBI-493777, EBI-493793;
SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton. Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Note=Recruited to the sub-membranous area on interaction with CDHR2.
TISSUE SPECIFICITY: Abundant in the testis.
PTM: Phosphorylated and ubiquitinated. N-terminal ubiquitination leads to degradation of MAST2 by proteasome-mediated proteolysis. N-terminal phosphorylation appears to be a prerequisite for ubiquitination (By similarity).
SIMILARITY: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
SIMILARITY: Contains 1 AGC-kinase C-terminal domain.
SIMILARITY: Contains 1 PDZ (DHR) domain.
SIMILARITY: Contains 1 protein kinase domain.
SEQUENCE CAUTION: Sequence=AAH15816.2; Type=Erroneous initiation; Sequence=AAH15816.2; Type=Frameshift; Positions=1114, 1387; Sequence=BAB40778.1; Type=Frameshift; Positions=1688; Sequence=CAH73245.1; Type=Erroneous gene model prediction; Sequence=CAI16563.1; Type=Erroneous gene model prediction; Sequence=CAI21706.1; Type=Erroneous gene model prediction;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: MAST2
Diseases sorted by gene-association score: breast mucinous carcinoma (13)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 48.55 RPKM in Testis
Total median expression: 775.18 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -160.70284-0.566 Picture PostScript Text
3' UTR -7.9056-0.141 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000961 - AGC-kinase_C
IPR011009 - Kinase-like_dom
IPR015022 - MA_Ser/Thr_Kinase_dom
IPR023142 - MAST_pre-PK_dom
IPR001478 - PDZ
IPR000719 - Prot_kinase_cat_dom
IPR002290 - Ser/Thr_dual-sp_kinase_dom
IPR008271 - Ser/Thr_kinase_AS

Pfam Domains:
PF00069 - Protein kinase domain
PF00595 - PDZ domain
PF07714 - Protein tyrosine and serine/threonine kinase
PF08926 - Domain of unknown function (DUF1908)
PF13180 - PDZ domain
PF17820 - PDZ domain

SCOP Domains:
140482 - MAST3 pre-PK domain-like
50156 - PDZ domain-like
56112 - Protein kinase-like (PK-like)

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2KQF - NMR MuPIT 2KYL - NMR MuPIT


ModBase Predicted Comparative 3D Structure on Q6P0Q8
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0000287 magnesium ion binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008017 microtubule binding
GO:0016301 kinase activity
GO:0016740 transferase activity
GO:0019902 phosphatase binding
GO:0046872 metal ion binding

Biological Process:
GO:0006468 protein phosphorylation
GO:0007010 cytoskeleton organization
GO:0016310 phosphorylation
GO:0018105 peptidyl-serine phosphorylation
GO:0035556 intracellular signal transduction
GO:0045075 regulation of interleukin-12 biosynthetic process
GO:0048515 spermatid differentiation

Cellular Component:
GO:0005737 cytoplasm
GO:0005856 cytoskeleton
GO:0005886 plasma membrane
GO:0015630 microtubule cytoskeleton
GO:0016020 membrane


-  Descriptions from all associated GenBank mRNAs
  AB047005 - Homo sapiens mRNA for MAST205, complete cds.
BC065499 - Homo sapiens microtubule associated serine/threonine kinase 2, mRNA (cDNA clone MGC:74852 IMAGE:5499830), complete cds.
AK055291 - Homo sapiens cDNA FLJ30729 fis, clone FEBRA2000035, highly similar to Microtubule-associated serine/threonine-protein kinase 2 (EC 2.7.11.1).
AK096519 - Homo sapiens cDNA FLJ39200 fis, clone OCBBF2005343, highly similar to Microtubule-associated serine/threonine-protein kinase 2 (EC 2.7.11.1).
AK027123 - Homo sapiens cDNA: FLJ23470 fis, clone HSI11950.
AK309510 - Homo sapiens cDNA, FLJ99551.
JD058423 - Sequence 39447 from Patent EP1572962.
JD144901 - Sequence 125925 from Patent EP1572962.
BC006166 - Homo sapiens microtubule associated serine/threonine kinase 2, mRNA (cDNA clone IMAGE:3959297), complete cds.
BC015816 - Homo sapiens microtubule associated serine/threonine kinase 2, mRNA (cDNA clone IMAGE:3841004), complete cds.
AB018350 - Homo sapiens mRNA for KIAA0807 protein, partial cds.
AL833919 - Homo sapiens mRNA; cDNA DKFZp434A0810 (from clone DKFZp434A0810).
AL137594 - Homo sapiens mRNA; cDNA DKFZp434N0810 (from clone DKFZp434N0810).
DQ578050 - Homo sapiens piRNA piR-46162, complete sequence.
JD422237 - Sequence 403261 from Patent EP1572962.
JD110966 - Sequence 91990 from Patent EP1572962.
JD365330 - Sequence 346354 from Patent EP1572962.
JD340370 - Sequence 321394 from Patent EP1572962.
JD270244 - Sequence 251268 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000361297.1, ENST00000361297.2, ENST00000361297.3, ENST00000361297.4, ENST00000361297.5, ENST00000361297.6, KIAA0807 , MAST2 , MAST205 , MAST2_HUMAN, NM_015112, O94899, Q5VT07, Q5VT08, Q6P0Q8, Q7LGC4, Q8NDG1, Q96B94, Q9BYE8, uc318bzc.1, uc318bzc.2
UCSC ID: ENST00000361297.7_8
RefSeq Accession: NM_015112.3
Protein: Q6P0Q8 (aka MAST2_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.