Human Gene MAZ (ENST00000322945.11_7) from GENCODE V47lift37
  Description: MYC associated zinc finger protein, transcript variant 5 (from RefSeq NR_074080.2)
Gencode Transcript: ENST00000322945.11_7
Gencode Gene: ENSG00000103495.15_12
Transcript (Including UTRs)
   Position: hg19 chr16:29,817,850-29,822,485 Size: 4,636 Total Exon Count: 5 Strand: +
Coding Region
   Position: hg19 chr16:29,818,023-29,821,552 Size: 3,530 Coding Exon Count: 5 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDGene Alleles
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:29,817,850-29,822,485)mRNA (may differ from genome)Protein (477 aa)
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BioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: MAZ_HUMAN
DESCRIPTION: RecName: Full=Myc-associated zinc finger protein; Short=MAZI; AltName: Full=Pur-1; AltName: Full=Purine-binding transcription factor; AltName: Full=Transcription factor Zif87; AltName: Full=ZF87; AltName: Full=Zinc finger protein 801;
FUNCTION: May function as a transcription factor with dual roles in transcription initiation and termination. Binds to two sites, ME1a1 and ME1a2, within the MYC promoter having greater affinity for the former. Also binds to multiple G/C-rich sites within the promoter of the Sp1 family of transcription factors.
SUBUNIT: Interacts with BPTF.
INTERACTION: P43146:DCC; NbExp=4; IntAct=EBI-1809742, EBI-1222919; P70211:Dcc (xeno); NbExp=2; IntAct=EBI-1809742, EBI-1798863; Q91562:dcc (xeno); NbExp=2; IntAct=EBI-1809742, EBI-1809954;
SUBCELLULAR LOCATION: Nucleus (Probable). Note=In brains of Alzheimer disease patients, present in a plaque-like structures.
TISSUE SPECIFICITY: Present in kidney, liver and brain. In the brain, highest levels are found in motor cortex and midfrontal cortex (at protein level).
SIMILARITY: Contains 6 C2H2-type zinc fingers.
SEQUENCE CAUTION: Sequence=AAB04121.1; Type=Erroneous initiation; Sequence=BAA12728.1; Type=Erroneous initiation;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 68.32 RPKM in Brain - Cerebellum
Total median expression: 1894.14 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -119.30173-0.690 Picture PostScript Text
3' UTR -400.30933-0.429 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR007087 - Znf_C2H2
IPR015880 - Znf_C2H2-like
IPR013087 - Znf_C2H2/integrase_DNA-bd

Pfam Domains:
PF00096 - Zinc finger, C2H2 type
PF13894 - C2H2-type zinc finger
PF13912 - C2H2-type zinc finger

SCOP Domains:
101447 - Formin homology 2 domain (FH2 domain)
57667 - beta-beta-alpha zinc fingers
57716 - Glucocorticoid receptor-like (DNA-binding domain)
82919 - Zn-finger domain of Sec23/24
57783 - Zinc beta-ribbon
57802 - Rubredoxin-like
57903 - FYVE/PHD zinc finger

ModBase Predicted Comparative 3D Structure on P56270
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding
GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0046872 metal ion binding

Biological Process:
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006367 transcription initiation from RNA polymerase II promoter
GO:0006369 termination of RNA polymerase II transcription

Cellular Component:
GO:0005634 nucleus


-  Descriptions from all associated GenBank mRNAs
  FJ532357 - Homo sapiens SAF-3 (MAZ) mRNA, complete cds, alternatively spliced.
D85131 - Homo sapiens mRNA for Myc-associated zinc-finger protein of human islet, complete cds.
U33819 - Human zinc-finger DNA binding protein (MAZ) mRNA, partial cds.
AF489858 - Homo sapiens serum amyloid A activating factor 2 mRNA, complete cds.
M93339 - Human zinc finger protein mRNA.
M94046 - Human zinc finger protein (MAZ) mRNA.
AB590469 - Synthetic construct DNA, clone: pFN21AB5889, Homo sapiens MAZ gene for MYC-associated zinc finger protein, without stop codon, in Flexi system.
EF059746 - Homo sapiens Myc-associated zinc finger protein mRNA, complete cds.
DQ594433 - Homo sapiens piRNA piR-60545, complete sequence.
L01420 - Homo sapiens zinc finger protein mRNA, complete cds.
BC041629 - Homo sapiens MYC-associated zinc finger protein (purine-binding transcription factor), mRNA (cDNA clone MGC:52386 IMAGE:4309842), complete cds.
KJ901566 - Synthetic construct Homo sapiens clone ccsbBroadEn_10960 MAZ gene, encodes complete protein.
AB209061 - Homo sapiens mRNA for Serum amyloid A activating factor 2 variant protein.
DQ591143 - Homo sapiens piRNA piR-58255, complete sequence.
JD026787 - Sequence 7811 from Patent EP1572962.
JD033385 - Sequence 14409 from Patent EP1572962.
DQ582470 - Homo sapiens piRNA piR-32582, complete sequence.
DQ590938 - Homo sapiens piRNA piR-58050, complete sequence.
JD025984 - Sequence 7008 from Patent EP1572962.
JD025985 - Sequence 7009 from Patent EP1572962.
AK074720 - Homo sapiens cDNA FLJ90239 fis, clone NT2RM2000773, highly similar to Homo sapiens Myc-associated zinc finger protein.
JD029392 - Sequence 10416 from Patent EP1572962.
BC039057 - Homo sapiens, clone IMAGE:4777034, mRNA.
JD489876 - Sequence 470900 from Patent EP1572962.
JD195863 - Sequence 176887 from Patent EP1572962.
JD053517 - Sequence 34541 from Patent EP1572962.
JD361786 - Sequence 342810 from Patent EP1572962.
JD019509 - Sequence 533 from Patent EP1572962.
JD390994 - Sequence 372018 from Patent EP1572962.
JD385037 - Sequence 366061 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A8QJL9, C6G496, ENST00000322945.1, ENST00000322945.10, ENST00000322945.2, ENST00000322945.3, ENST00000322945.4, ENST00000322945.5, ENST00000322945.6, ENST00000322945.7, ENST00000322945.8, ENST00000322945.9, G5E927, H3BQD6, MAZ_HUMAN, NR_074080, P56270, Q15703, Q8NFN7, Q99443, uc317rjf.1, uc317rjf.2, ZNF801
UCSC ID: ENST00000322945.11_7
RefSeq Accession: NM_002383.4
Protein: P56270 (aka MAZ_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.