Human Gene MCMBP (ENST00000369077.4_10) from GENCODE V47lift37
  Description: minichromosome maintenance complex binding protein, transcript variant 3 (from RefSeq NM_001256379.2)
Gencode Transcript: ENST00000369077.4_10
Gencode Gene: ENSG00000197771.13_12
Transcript (Including UTRs)
   Position: hg19 chr10:121,588,952-121,632,355 Size: 43,404 Total Exon Count: 16 Strand: -
Coding Region
   Position: hg19 chr10:121,590,986-121,632,096 Size: 41,111 Coding Exon Count: 16 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDGene Alleles
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr10:121,588,952-121,632,355)mRNA (may differ from genome)Protein (640 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMGIOMIMPubMedUniProtKBBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: MCMBP_HUMAN
DESCRIPTION: RecName: Full=Mini-chromosome maintenance complex-binding protein; Short=MCM-BP; Short=MCM-binding protein;
FUNCTION: Associated component of the MCM complex that acts as a regulator of DNA replication. Binds to the MCM complex during late S phase and promotes the disassembly of the MCM complex from chromatin, thereby acting as a key regulator of pre-replication complex (pre-RC) unloading from replicated DNA. Can dissociate the MCM complex without addition of ATP; probably acts by destabilizing interactions of each individual subunits of the MCM complex. Required for sister chromatid cohesion.
SUBUNIT: Interacts with the MCM complex: associates with the MCM3- 7 complex which lacks MCM2, while it does not interact with the MCM complex when MCM2 is present (MCM2-7 complex). Interacts with the RPA complex, when composed of all RPA1, RPA2 and RPA3 components, but not with RPA1 or RPA2 alone.
SUBCELLULAR LOCATION: Nucleus. Note=Associates with chromatin. Highly associated with chromatin in G1/S and S phases, reduced binding to chromatin in G2, and further decreased binding in early M phase. It then reassociates with chromatin in late M phase. Dissociates from chromatin later than component of the MCM complex.
SIMILARITY: Belongs to the MCMBP family.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 15.17 RPKM in Cells - EBV-transformed lymphocytes
Total median expression: 451.00 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -155.50259-0.600 Picture PostScript Text
3' UTR -510.902034-0.251 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR019140 - MCM_complex-bd

Pfam Domains:
PF09739 - Mini-chromosome maintenance replisome factor

ModBase Predicted Comparative 3D Structure on Q9BTE3
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003682 chromatin binding
GO:0005515 protein binding

Biological Process:
GO:0006260 DNA replication
GO:0006261 DNA-dependent DNA replication
GO:0007049 cell cycle
GO:0007062 sister chromatid cohesion
GO:0051301 cell division

Cellular Component:
GO:0000790 nuclear chromatin
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0042555 MCM complex


-  Descriptions from all associated GenBank mRNAs
  AK023143 - Homo sapiens cDNA FLJ13081 fis, clone NT2RP3002033.
LF384304 - JP 2014500723-A/191807: Polycomb-Associated Non-Coding RNAs.
JD457260 - Sequence 438284 from Patent EP1572962.
JD405600 - Sequence 386624 from Patent EP1572962.
JD128692 - Sequence 109716 from Patent EP1572962.
JD249448 - Sequence 230472 from Patent EP1572962.
JD285714 - Sequence 266738 from Patent EP1572962.
JD435713 - Sequence 416737 from Patent EP1572962.
JD168530 - Sequence 149554 from Patent EP1572962.
JD507718 - Sequence 488742 from Patent EP1572962.
JD279569 - Sequence 260593 from Patent EP1572962.
JD516066 - Sequence 497090 from Patent EP1572962.
LF370131 - JP 2014500723-A/177634: Polycomb-Associated Non-Coding RNAs.
JD231607 - Sequence 212631 from Patent EP1572962.
BC000935 - Homo sapiens chromosome 10 open reading frame 119, mRNA (cDNA clone IMAGE:3448218), partial cds.
BC004183 - Homo sapiens chromosome 10 open reading frame 119, mRNA (cDNA clone MGC:2809 IMAGE:2961492), complete cds.
BC007219 - Homo sapiens chromosome 10 open reading frame 119, mRNA (cDNA clone MGC:15010 IMAGE:2961492), complete cds.
AK094075 - Homo sapiens cDNA FLJ36756 fis, clone UTERU2018200.
JD512349 - Sequence 493373 from Patent EP1572962.
CR457299 - Homo sapiens full open reading frame cDNA clone RZPDo834D0921D for gene FLJ13081, hypothetical protein FLJ13081; complete cds, incl. stopcodon.
JF432376 - Synthetic construct Homo sapiens clone IMAGE:100073573 chromosome 10 open reading frame 119 (C10orf119) gene, encodes complete protein.
KU178788 - Homo sapiens minichromosome maintenance complex binding protein isoform 1 (MCMBP) mRNA, partial cds, alternatively spliced.
KU178789 - Homo sapiens minichromosome maintenance complex binding protein isoform 3 (MCMBP) mRNA, complete cds, alternatively spliced.
LF370133 - JP 2014500723-A/177636: Polycomb-Associated Non-Coding RNAs.
CU678602 - Synthetic construct Homo sapiens gateway clone IMAGE:100020721 5' read C10orf119 mRNA.
AK001928 - Homo sapiens cDNA FLJ11066 fis, clone PLACE1004885.
LF370134 - JP 2014500723-A/177637: Polycomb-Associated Non-Coding RNAs.
LF370136 - JP 2014500723-A/177639: Polycomb-Associated Non-Coding RNAs.
LF370137 - JP 2014500723-A/177640: Polycomb-Associated Non-Coding RNAs.
JD142337 - Sequence 123361 from Patent EP1572962.
MA619881 - JP 2018138019-A/191807: Polycomb-Associated Non-Coding RNAs.
MA605708 - JP 2018138019-A/177634: Polycomb-Associated Non-Coding RNAs.
MA605710 - JP 2018138019-A/177636: Polycomb-Associated Non-Coding RNAs.
MA605711 - JP 2018138019-A/177637: Polycomb-Associated Non-Coding RNAs.
MA605713 - JP 2018138019-A/177639: Polycomb-Associated Non-Coding RNAs.
MA605714 - JP 2018138019-A/177640: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: B3KSP7, C10orf119, ENST00000369077.1, ENST00000369077.2, ENST00000369077.3, MCMBP_HUMAN, NM_001256379, Q6IA56, Q9BTE3, Q9BVT9, Q9H916, uc318hhx.1, uc318hhx.2
UCSC ID: ENST00000369077.4_10
RefSeq Accession: NM_001256378.2
Protein: Q9BTE3 (aka MCMBP_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.