Human Gene MOG (ENST00000376917.8_9) from GENCODE V47lift37
  Description: myelin oligodendrocyte glycoprotein, transcript variant alpha1 (from RefSeq NM_206809.4)
Gencode Transcript: ENST00000376917.8_9
Gencode Gene: ENSG00000204655.12_14
Transcript (Including UTRs)
   Position: hg19 chr6:29,624,869-29,640,142 Size: 15,274 Total Exon Count: 8 Strand: +
Coding Region
   Position: hg19 chr6:29,624,987-29,638,962 Size: 13,976 Coding Exon Count: 8 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr6:29,624,869-29,640,142)mRNA (may differ from genome)Protein (247 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
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HGNCMalacardsMGIOMIMPubMedUniProtKB
WikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: MOG_HUMAN
DESCRIPTION: RecName: Full=Myelin-oligodendrocyte glycoprotein; Flags: Precursor;
FUNCTION: Mediates homophilic cell-cell adhesion (By similarity). Minor component of the myelin sheath. May be involved in completion and/or maintenance of the myelin sheath and in cell- cell communication.
SUBUNIT: Homodimer (By similarity). May form heterodimers between the different isoforms.
SUBCELLULAR LOCATION: Isoform 1: Cell membrane; Multi-pass membrane protein (Potential).
SUBCELLULAR LOCATION: Isoform 5: Cell membrane; Multi-pass membrane protein (Potential).
SUBCELLULAR LOCATION: Isoform 2: Cell membrane; Single-pass type I membrane protein (Potential).
SUBCELLULAR LOCATION: Isoform 3: Cell membrane; Single-pass type I membrane protein (Potential).
SUBCELLULAR LOCATION: Isoform 4: Cell membrane; Single-pass type I membrane protein (Potential).
SUBCELLULAR LOCATION: Isoform 6: Cell membrane; Single-pass type I membrane protein (Potential).
SUBCELLULAR LOCATION: Isoform 7: Cell membrane; Single-pass type I membrane protein (Potential).
SUBCELLULAR LOCATION: Isoform 8: Cell membrane; Single-pass type I membrane protein (Potential).
SUBCELLULAR LOCATION: Isoform 9: Cell membrane; Single-pass type I membrane protein (Potential).
TISSUE SPECIFICITY: Found exclusively in the CNS, where it is localized on the surface of myelin and oligodendrocyte cytoplasmic membranes.
DISEASE: Defects in MOG are the cause of narcolepsy type 7 (NRCLP7) [MIM:614250]. Neurological disabling sleep disorder, characterized by excessive daytime sleepiness, sleep fragmentation, symptoms of abnormal rapid-eye-movement (REM) sleep, cataplexy, hypnagogic hallucinations, and sleep paralysis. Cataplexy is a sudden loss of muscle tone triggered by emotions, which is the most valuable clinical feature used to diagnose narcolepsy. Human narcolepsy is primarily a sporadically occurring disorder but familial clustering has been observed.
SIMILARITY: Belongs to the immunoglobulin superfamily. BTN/MOG family.
SIMILARITY: Contains 1 Ig-like V-type (immunoglobulin-like) domain.
CAUTION: Do not confuse myelin-oligodendrocyte glycoprotein (MOG) with oligodendrocyte-myelin glycoprotein (OMG).
WEB RESOURCE: Name=Wikipedia; Note=Myelin oligodendrocyte glycoprotein entry; URL="http://en.wikipedia.org/wiki/Myelin_oligodendrocyte_glycoprotein";

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: MOG
Diseases sorted by gene-association score: narcolepsy 7* (1278), narcolepsy* (47), central nervous system disease (32), rubella (29), primary progressive multiple sclerosis (21), optic neuritis (20), nervous system disease (19), acute disseminated encephalomyelitis (18), relapsing-remitting multiple sclerosis (16), neuromyelitis optica (15), demyelinating disease (12), multiple sclerosis, disease progression, modifier of (12), panencephalitis, subacute sclerosing (11), allergic encephalomyelitis (10), spinal cord disease (8), pediatric multiple sclerosis (7), sleep disorder (6), myelitis (6), neuritis (6), cranial nerve disease (5), viral encephalitis (5), neuroretinitis (5), optic nerve disease (5), internuclear ophthalmoplegia (4), immunodeficiency with hyper-igm, type 2 (4), hypersensitivity reaction type ii disease (2)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 272.52 RPKM in Brain - Spinal cord (cervical c-1)
Total median expression: 764.21 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -44.00118-0.373 Picture PostScript Text
3' UTR -352.101180-0.298 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR007110 - Ig-like
IPR013783 - Ig-like_fold
IPR013106 - Ig_V-set
IPR003596 - Ig_V-set_subgr
IPR016663 - Myelin-oligodendrocyte_glycop

Pfam Domains:
PF07686 - Immunoglobulin V-set domain

SCOP Domains:
48726 - Immunoglobulin

Protein Data Bank (PDB) 3-D Structure
MuPIT help
1Q70 - Model


ModBase Predicted Comparative 3D Structure on Q16653
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0001618 virus receptor activity

Biological Process:
GO:0007155 cell adhesion
GO:0007417 central nervous system development
GO:0016032 viral process
GO:0046718 viral entry into host cell

Cellular Component:
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane


-  Descriptions from all associated GenBank mRNAs
  AK308949 - Homo sapiens cDNA, FLJ98990.
AB209815 - Homo sapiens mRNA for myelin oligodendrocyte glycoprotein isoform alpha1 precursor variant protein.
U64564 - Human myelin/oligodendrocyte glycoprotein-25.1kD (Mog) mRNA, complete cds.
BC035938 - Homo sapiens myelin oligodendrocyte glycoprotein, mRNA (cDNA clone MGC:26137 IMAGE:4791512), complete cds.
AK312892 - Homo sapiens cDNA, FLJ93336, highly similar to Homo sapiens myelin oligodendrocyte glycoprotein (MOG), mRNA.
JD132137 - Sequence 113161 from Patent EP1572962.
JD148763 - Sequence 129787 from Patent EP1572962.
AK295213 - Homo sapiens cDNA FLJ51848 complete cds, highly similar to Myelin-oligodendrocyte glycoprotein precursor.
JD217013 - Sequence 198037 from Patent EP1572962.
KJ901580 - Synthetic construct Homo sapiens clone ccsbBroadEn_10974 MOG gene, encodes complete protein.
U18798 - Human myelin/oligodendrocyte glycoprotein MOG alpha 1 isoform (MOG) mRNA, complete cds.
U18799 - Human myelin/oligodendrocyte glycoprotein MOG alpha 2 isoform (MOG) mRNA, complete cds.
U18843 - Human myelin/oligodendrocyte glycoprotein MOG alpha 3 isoform (MOG) mRNA, complete cds.
DQ895585 - Synthetic construct Homo sapiens clone IMAGE:100010045; FLH263697.01L; RZPDo839E01147D myelin oligodendrocyte glycoprotein (MOG) gene, encodes complete protein.
DQ895586 - Synthetic construct Homo sapiens clone IMAGE:100010046; FLH185707.01L; RZPDo839E02147D myelin oligodendrocyte glycoprotein (MOG) gene, encodes complete protein.
EU176510 - Synthetic construct Homo sapiens clone IMAGE:100011651; FLH264074.01L; RZPDo839F02257D myelin oligodendrocyte glycoprotein (MOG) gene, encodes complete protein.
DQ892374 - Synthetic construct clone IMAGE:100005004; FLH185711.01X; RZPDo839E02148D myelin oligodendrocyte glycoprotein (MOG) gene, encodes complete protein.
U18800 - Homo sapiens myelin/oligodendrocyte glycoprotein alpha 4 isoform (MOG) mRNA, complete cds, alternatively spliced.
X74511 - H.sapiens mRNA for myelin oligodendrocyte glycoprotein.
AY566852 - Homo sapiens MOG beta-1 mRNA, complete cds, alternatively spliced.
U18801 - Human myelin/oligodendrocyte glycoprotein MOG beta 1 isoform (MOG) mRNA, complete cds.
U18803 - Human myelin/oligodendrocyte glycoprotein MOG beta 2 isoform (MOG) mRNA, complete cds.
U18840 - Human myelin/oligodendrocyte glycoprotein MOG beta 3 isoform (MOG) mRNA, complete cds.
AY566851 - Homo sapiens MOG IG-2' mRNA, partial cds, alternatively spliced.
AY566849 - Homo sapiens MOG AluA mRNA, partial cds, alternatively spliced.
AY566848 - Homo sapiens MOG Ig-AluB mRNA, partial cds, alternatively spliced.
AY566850 - Homo sapiens MOG AluB mRNA, partial cds, alternatively spliced.
AY566846 - Homo sapiens MOG alpha-5 mRNA, partial cds, alternatively spliced.
AY566847 - Homo sapiens MOG alpha-6 mRNA, partial cds, alternatively spliced.
AY566853 - Homo sapiens MOG beta-2 mRNA, partial cds, alternatively spliced.
AY566854 - Homo sapiens MOG beta-3 mRNA, partial cds, alternatively spliced.
U64565 - Human myelin/oligodendrocyte glycoprotein-25.6kD (Mog) mRNA, partial cds.
U64566 - Human myelin/oligodendrocyte glycoprotein-22.7kD (Mog) mRNA, partial cds.
U64567 - Human myelin/oligodendrocyte glycoprotein-21.0kD (Mog) mRNA, partial cds.
U64568 - Human myelin/oligodendrocyte glycoprotein-20.5kD (Mog) mRNA, partial cds.
U64569 - Human myelin/oligodendrocyte glycoprotein-20.2kD (Mog) mRNA, partial cds.
U64570 - Human myelin/oligodendrocyte glycoprotein-16.3kD(a) (Mog) mRNA, partial cds.
U64571 - Human myelin/oligodendrocyte glycoprotein-16.3kD(b) (Mog) mRNA, partial cds.
JD427173 - Sequence 408197 from Patent EP1572962.
JD178132 - Sequence 159156 from Patent EP1572962.
JD292320 - Sequence 273344 from Patent EP1572962.
JD285878 - Sequence 266902 from Patent EP1572962.
JD518803 - Sequence 499827 from Patent EP1572962.
JD385798 - Sequence 366822 from Patent EP1572962.
JD204948 - Sequence 185972 from Patent EP1572962.
JD260855 - Sequence 241879 from Patent EP1572962.
JD435668 - Sequence 416692 from Patent EP1572962.
JD092298 - Sequence 73322 from Patent EP1572962.
JD045301 - Sequence 26325 from Patent EP1572962.
JD215491 - Sequence 196515 from Patent EP1572962.
JD275111 - Sequence 256135 from Patent EP1572962.
JD187254 - Sequence 168278 from Patent EP1572962.
JD363719 - Sequence 344743 from Patent EP1572962.
JD414011 - Sequence 395035 from Patent EP1572962.
JD171752 - Sequence 152776 from Patent EP1572962.
JD268094 - Sequence 249118 from Patent EP1572962.
JD180010 - Sequence 161034 from Patent EP1572962.
JD076502 - Sequence 57526 from Patent EP1572962.
JD376768 - Sequence 357792 from Patent EP1572962.
JD417703 - Sequence 398727 from Patent EP1572962.
JD482971 - Sequence 463995 from Patent EP1572962.
JD130964 - Sequence 111988 from Patent EP1572962.
JD237768 - Sequence 218792 from Patent EP1572962.
JD313435 - Sequence 294459 from Patent EP1572962.
JD332325 - Sequence 313349 from Patent EP1572962.
JD448306 - Sequence 429330 from Patent EP1572962.
JD351709 - Sequence 332733 from Patent EP1572962.
JD523383 - Sequence 504407 from Patent EP1572962.
JD406716 - Sequence 387740 from Patent EP1572962.
JD461339 - Sequence 442363 from Patent EP1572962.
JD405269 - Sequence 386293 from Patent EP1572962.
JD367032 - Sequence 348056 from Patent EP1572962.
JD258720 - Sequence 239744 from Patent EP1572962.
JD258721 - Sequence 239745 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A6NDR4, A6NNJ9, A8MY31, B0UZR9, E9PGF0, ENST00000376917.1, ENST00000376917.2, ENST00000376917.3, ENST00000376917.4, ENST00000376917.5, ENST00000376917.6, ENST00000376917.7, F8W9D5, MOG_HUMAN, NM_206809, O00713, O00714, O00715, Q13054, Q13055, Q14855, Q16653, Q29ZN8, Q56UY0, Q5JNX7, Q5JNY1, Q5JNY2, Q5JNY4, Q5SSB5, Q5SSB6, Q5STL9, Q5STM0, Q5STM1, Q5STM2, Q5STM5, Q5SUK5, Q5SUK7, Q5SUK8, Q5SUK9, Q5SUL0, Q5SUL1, Q8IYG5, Q92891, Q92892, Q92893, Q92894, Q92895, Q93053, Q96KU9, Q96KV0, Q96KV1, Q99605, uc318ngn.1, uc318ngn.2
UCSC ID: ENST00000376917.8_9
RefSeq Accession: NM_206809.4
Protein: Q16653 (aka MOG_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.