The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q9BYD1
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
AK307322 - Homo sapiens cDNA, FLJ97270. LF210272 - JP 2014500723-A/17775: Polycomb-Associated Non-Coding RNAs. AB049640 - Homo sapiens MRPL13 mRNA for mitochondrial ribosomal protein L13 (L13mt), complete cds. BC009190 - Homo sapiens mitochondrial ribosomal protein L13, mRNA (cDNA clone MGC:15170 IMAGE:3956315), complete cds. AF112214 - Homo sapiens ribosomal protein L13 mRNA, complete cds. AK123239 - Homo sapiens cDNA FLJ41245 fis, clone BRAMY2032589. BC021744 - Homo sapiens mitochondrial ribosomal protein L13, mRNA (cDNA clone MGC:33899 IMAGE:5260243), complete cds. JD223976 - Sequence 205000 from Patent EP1572962. LF336645 - JP 2014500723-A/144148: Polycomb-Associated Non-Coding RNAs. JD060171 - Sequence 41195 from Patent EP1572962. JD318002 - Sequence 299026 from Patent EP1572962. LF336646 - JP 2014500723-A/144149: Polycomb-Associated Non-Coding RNAs. JD080729 - Sequence 61753 from Patent EP1572962. JD507287 - Sequence 488311 from Patent EP1572962. JD148944 - Sequence 129968 from Patent EP1572962. AK311924 - Homo sapiens cDNA, FLJ92191, Homo sapiens mitochondrial ribosomal protein L13 (MRPL13), nuclear gene encoding mitochondrial protein, mRNA. DQ893117 - Synthetic construct Homo sapiens clone IMAGE:100005747; FLH263507.01X; RZPDo839D0379D mitochondrial ribosomal protein L13 (MRPL13) gene, encodes complete protein; nuclear gene for mitochondrial product. DQ893487 - Synthetic construct clone IMAGE:100006117; FLH193938.01X; RZPDo839D0879D mitochondrial ribosomal protein L13 (MRPL13) gene, encodes complete protein; nuclear gene for mitochondrial product. KJ893669 - Synthetic construct Homo sapiens clone ccsbBroadEn_03063 MRPL13 gene, encodes complete protein. DQ896395 - Synthetic construct Homo sapiens clone IMAGE:100010855; FLH193934.01L; RZPDo839D0869D mitochondrial ribosomal protein L13 (MRPL13) gene, encodes complete protein; nuclear gene for mitochondrial product. CU692406 - Synthetic construct Homo sapiens gateway clone IMAGE:100020190 5' read MRPL13 mRNA. JD035662 - Sequence 16686 from Patent EP1572962. JD021415 - Sequence 2439 from Patent EP1572962. JD469439 - Sequence 450463 from Patent EP1572962. MA445849 - JP 2018138019-A/17775: Polycomb-Associated Non-Coding RNAs. MA572222 - JP 2018138019-A/144148: Polycomb-Associated Non-Coding RNAs. MA572223 - JP 2018138019-A/144149: Polycomb-Associated Non-Coding RNAs.
Biochemical and Signaling Pathways
Reactome (by CSHL, EBI, and GO)
Protein Q9BYD1 (Reactome details) participates in the following event(s):
R-HSA-5389839 39S subunit binds 28S subunit:mRNA:fMet-tRNA R-HSA-5419273 Hydrolysis of GTP and dissociation of 28S and 39S subunits R-HSA-5389848 TUFM:GTP:aminoacyl-tRNA binds 55S ribosome:mRNA:fMet-tRNA R-HSA-5389857 Peptide transfer from P-site to A-site (peptide bond formation) R-HSA-5389842 TUFM hydrolyzes GTP and TUFM:GDP dissociates from 55S ribosome R-HSA-5419261 55S ribosome with peptidyl-tRNA in A site binds GFM1:GTP R-HSA-5419281 MRRF binds 55S ribosome:mRNA:tRNA R-HSA-5419279 Translocation of peptidyl-tRNA from A-site to P-site (and translocation of 55S ribosome by 3 bases along mRNA) R-HSA-5419264 MTRF1L (MTRF1a) or ICT1 binds stop codon in 55S ribosome:mRNA:peptidyl-tRNA R-HSA-5419277 GFM2:GTP binds 55S ribosome:mRNA:tRNA:MRRF releasing mRNA and tRNA R-HSA-5368286 Mitochondrial translation initiation R-HSA-5419276 Mitochondrial translation termination R-HSA-5368287 Mitochondrial translation R-HSA-5389840 Mitochondrial translation elongation R-HSA-72766 Translation R-HSA-392499 Metabolism of proteins
US Server
Sequence and Links to Tools and Databases 
Common Gene Haplotype Alleles 
