Human Gene NOS3 (ENST00000297494.8_5) from GENCODE V47lift37
  Description: nitric oxide synthase 3, transcript variant 1 (from RefSeq NM_000603.5)
Gencode Transcript: ENST00000297494.8_5
Gencode Gene: ENSG00000164867.11_10
Transcript (Including UTRs)
   Position: hg19 chr7:150,688,105-150,711,676 Size: 23,572 Total Exon Count: 27 Strand: +
Coding Region
   Position: hg19 chr7:150,690,892-150,711,257 Size: 20,366 Coding Exon Count: 26 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:150,688,105-150,711,676)mRNA (may differ from genome)Protein (1203 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
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HGNCMalacardsMGIOMIMPubMedReactome
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: NOS3_HUMAN
DESCRIPTION: RecName: Full=Nitric oxide synthase, endothelial; EC=1.14.13.39; AltName: Full=Constitutive NOS; Short=cNOS; AltName: Full=EC-NOS; AltName: Full=Endothelial NOS; Short=eNOS; AltName: Full=NOS type III; Short=NOSIII;
FUNCTION: Produces nitric oxide (NO) which is implicated in vascular smooth muscle relaxation through a cGMP-mediated signal transduction pathway. NO mediates vascular endothelial growth factor (VEGF)-induced angiogenesis in coronary vessels and promotes blood clotting through the activation of platelets.
FUNCTION: Isoform eNOS13C: Lacks eNOS activity, dominant-negative form that may down-regulate eNOS activity by forming heterodimers with isoform 1.
CATALYTIC ACTIVITY: 2 L-arginine + 3 NADPH + 4 O(2) = 2 L- citrulline + 2 nitric oxide + 3 NADP(+) + 4 H(2)O.
COFACTOR: Heme group.
COFACTOR: Binds 1 FAD.
COFACTOR: Binds 1 FMN.
COFACTOR: Tetrahydrobiopterin (BH4). May stabilize the dimeric form of the enzyme.
ENZYME REGULATION: Stimulated by calcium/calmodulin. Inhibited by NOSIP and NOSTRIN.
SUBUNIT: Homodimer. Interacts with NOSIP and NOSTRIN.
INTERACTION: Q16543:CDC37; NbExp=4; IntAct=EBI-1391623, EBI-295634; Q8IVI9:NOSTRIN; NbExp=7; IntAct=EBI-1391623, EBI-1391643; P50502:ST13; NbExp=3; IntAct=EBI-1391623, EBI-357285;
SUBCELLULAR LOCATION: Cell membrane. Membrane, caveola. Cytoplasm, cytoskeleton. Golgi apparatus. Note=Specifically associates with actin cytoskeleton in the G2 phase of the cell cycle; which is favored by interaction with NOSIP and results in a reduced enzymatic activity.
TISSUE SPECIFICITY: Platelets, placenta, liver and kidney.
PTM: Phosphorylation by AMPK at Ser-1177 in the presence of Ca(2+)-calmodulin (CaM) activates activity. In absence of Ca(2+)- calmodulin, AMPK also phosphorylates Thr-495, resulting in inhibition of activity (By similarity). Phosphorylation of Ser-114 by CDK5 reduces activity.
POLYMORPHISM: Variation in NOS3 seem to be associated with susceptibility to coronary spasm.
SIMILARITY: Belongs to the NOS family.
SIMILARITY: Contains 1 FAD-binding FR-type domain.
SIMILARITY: Contains 1 flavodoxin-like domain.
WEB RESOURCE: Name=Wikipedia; Note=Nitric oxide synthase entry; URL="http://en.wikipedia.org/wiki/Nitric_oxide_synthase";
WEB RESOURCE: Name=GeneReviews; URL="http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/NOS3";
WEB RESOURCE: Name=SeattleSNPs; URL="http://pga.gs.washington.edu/data/nos3/";

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: NOS3
Diseases sorted by gene-association score: preeclampsia/eclampsia 1* (593), alzheimer disease* (347), stroke, ischemic* (337), hypertension, essential* (217), ischemic heart disease (43), pre-eclampsia (36), alzheimer disease-2 (33), acute chest syndrome (27), alzheimer's disease 19 (25), vascular disease (21), limb ischemia (17), priapism (16), buerger disease (16), adrenal gland pheochromocytoma (15), coronary artery vasospasm (14), hepatopulmonary syndrome (14), atherosclerosis (13), sexual disorder (13), aortic coarctation (13), carotid artery occlusion (12), carotid artery thrombosis (12), adiponectin deficiency (12), pulmonary hypertension (11), portal hypertension (11), hemifacial spasm (10), chronic mountain sickness (10), renal artery disease (10), coronary artery disease (10), renovascular hypertension (10), impotence (10), pulmonary edema (9), spermatic cord torsion (9), acute mountain sickness (9), ischemia (9), cerebral artery occlusion (9), hyperhomocysteinemia (9), fabry disease (8), nonarteritic anterior ischemic optic neuropathy (8), prinzmetal's variant angina (8), arteritic anterior ischemic optic neuropathy (8), intracranial vasospasm (8), central sleep apnea (8), diastolic heart failure (8), autosomal dominant polycystic kidney disease (8), hepatic vascular disease (8), ischemic optic neuropathy (7), orthostatic intolerance (7), peripheral artery disease (7), hereditary hemorrhagic telangiectasia (7), diabetic macular edema (7), purulent labyrinthitis (7), testicular disease (7), persistent fetal circulation syndrome (6), mitral valve disease (6), renal artery atheroma (6), tetrahydrobiopterin deficiency (6), obstructive sleep apnea (6), chronic myocardial ischemia (6), sleep apnea (6), varicocele (6), microvascular complications of diabetes 5 (6), congenital diaphragmatic hernia (6), vasculogenic impotence (4), toxic myocarditis (4), photokeratitis (4), jejunoileitis (4), hyperglycemia (4), heart disease (4), myocardial infarction (3), artery disease (3), diabetes mellitus, insulin-dependent (2), diabetes mellitus, noninsulin-dependent (2), glucose metabolism disease (1), acquired metabolic disease (1)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 30.40 RPKM in Spleen
Total median expression: 160.20 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -84.00335-0.251 Picture PostScript Text
3' UTR -128.70419-0.307 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR003097 - FAD-binding_1
IPR017927 - Fd_Rdtase_FAD-bd
IPR001094 - Flavdoxin
IPR008254 - Flavodoxin/NO_synth
IPR001709 - Flavoprot_Pyr_Nucl_cyt_Rdtase
IPR023173 - NADPH_Cyt_P450_Rdtase_dom3
IPR004030 - NO_synthase_oxygenase_dom
IPR026009 - NOS
IPR012144 - NOS_met
IPR001433 - OxRdtase_FAD/NAD-bd
IPR017938 - Riboflavin_synthase-like_b-brl

Pfam Domains:
PF00175 - Oxidoreductase NAD-binding domain
PF00258 - Flavodoxin
PF00667 - FAD binding domain
PF02898 - Nitric oxide synthase, oxygenase domain

SCOP Domains:
63380 - Riboflavin synthase domain-like
52218 - Flavoproteins
52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain
56512 - Nitric oxide (NO) synthase oxygenase domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help
1M9J - X-ray MuPIT 1M9K - X-ray MuPIT 1M9M - X-ray MuPIT 1M9Q - X-ray MuPIT 1M9R - X-ray MuPIT 2LL7 - NMR MuPIT 3EAH - X-ray MuPIT 3NOS - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on P29474
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003785 actin monomer binding
GO:0003958 NADPH-hemoprotein reductase activity
GO:0004517 nitric-oxide synthase activity
GO:0005515 protein binding
GO:0005516 calmodulin binding
GO:0010181 FMN binding
GO:0016491 oxidoreductase activity
GO:0020037 heme binding
GO:0034617 tetrahydrobiopterin binding
GO:0034618 arginine binding
GO:0046870 cadmium ion binding
GO:0046872 metal ion binding
GO:0050660 flavin adenine dinucleotide binding
GO:0050661 NADP binding
GO:0097110 scaffold protein binding

Biological Process:
GO:0001525 angiogenesis
GO:0001542 ovulation from ovarian follicle
GO:0001701 in utero embryonic development
GO:0001974 blood vessel remodeling
GO:0002028 regulation of sodium ion transport
GO:0003057 regulation of the force of heart contraction by chemical signal
GO:0003100 regulation of systemic arterial blood pressure by endothelin
GO:0006527 arginine catabolic process
GO:0006809 nitric oxide biosynthetic process
GO:0007005 mitochondrion organization
GO:0007263 nitric oxide mediated signal transduction
GO:0008217 regulation of blood pressure
GO:0008285 negative regulation of cell proliferation
GO:0009408 response to heat
GO:0010544 negative regulation of platelet activation
GO:0014740 negative regulation of muscle hyperplasia
GO:0014806 smooth muscle hyperplasia
GO:0019430 removal of superoxide radicals
GO:0030324 lung development
GO:0031284 positive regulation of guanylate cyclase activity
GO:0031663 lipopolysaccharide-mediated signaling pathway
GO:0034405 response to fluid shear stress
GO:0042311 vasodilation
GO:0043267 negative regulation of potassium ion transport
GO:0043536 positive regulation of blood vessel endothelial cell migration
GO:0043542 endothelial cell migration
GO:0045454 cell redox homeostasis
GO:0045766 positive regulation of angiogenesis
GO:0045776 negative regulation of blood pressure
GO:0050880 regulation of blood vessel size
GO:0050999 regulation of nitric-oxide synthase activity
GO:0051186 cofactor metabolic process
GO:0051346 negative regulation of hydrolase activity
GO:0051926 negative regulation of calcium ion transport
GO:0055114 oxidation-reduction process
GO:1902042 negative regulation of extrinsic apoptotic signaling pathway via death domain receptors

Cellular Component:
GO:0000139 Golgi membrane
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005794 Golgi apparatus
GO:0005829 cytosol
GO:0005856 cytoskeleton
GO:0005886 plasma membrane
GO:0005901 caveola
GO:0016020 membrane
GO:0030666 endocytic vesicle membrane


-  Descriptions from all associated GenBank mRNAs
  BC063294 - Homo sapiens nitric oxide synthase 3 (endothelial cell), mRNA (cDNA clone MGC:71636 IMAGE:30340813), complete cds.
AK300390 - Homo sapiens cDNA FLJ50216 complete cds, highly similar to Nitric-oxide synthase, endothelial (EC 1.14.13.39).
AK292928 - Homo sapiens cDNA FLJ77889 complete cds, highly similar to Homo sapiens nitric oxide synthase 3 (endothelial cell), mRNA.
AK302686 - Homo sapiens cDNA FLJ55897 complete cds, highly similar to Nitric-oxide synthase, endothelial (EC 1.14.13.39).
LF357830 - JP 2014500723-A/165333: Polycomb-Associated Non-Coding RNAs.
LF206782 - JP 2014500723-A/14285: Polycomb-Associated Non-Coding RNAs.
M93718 - Human nitric oxide synthase mRNA, complete cds.
AK315213 - Homo sapiens cDNA, FLJ96207, highly similar to Homo sapiens nitric oxide synthase 3 (endothelial cell) (NOS3),mRNA.
M95296 - Human nitric oxide synthase mRNA, complete cds.
AK223636 - Homo sapiens mRNA for nitric oxide synthase 3 (endothelial cell) variant, clone: FCC128B01.
AK225827 - Homo sapiens mRNA for nitric oxide synthase 3 variant, clone: FCC128B01.
BC069465 - Homo sapiens nitric oxide synthase 3 (endothelial cell), mRNA (cDNA clone MGC:97151 IMAGE:7262393), complete cds.
HQ257992 - Synthetic construct Homo sapiens clone IMAGE:100072301 nitric oxide synthase 3 (endothelial cell) (NOS3), transcript variant 1 (NOS3) gene, encodes complete protein.
DQ256129 - Homo sapiens endothelial nitric oxide synthase splice variant eNOS13A mRNA, complete cds, alternatively spliced.
DQ256130 - Homo sapiens endothelial nitric oxide synthase splice variant eNOS13B mRNA, complete cds, alternatively spliced.
DQ256131 - Homo sapiens endothelial nitric oxide synthase splice variant eNOS13C mRNA, complete cds, alternatively spliced.
AF400594 - Homo sapiens endothelial nitric oxide synthase (NOS3) mRNA, complete cds.
LF357832 - JP 2014500723-A/165335: Polycomb-Associated Non-Coding RNAs.
LF357833 - JP 2014500723-A/165336: Polycomb-Associated Non-Coding RNAs.
S80791 - nitric oxide synthase [human, blood platelets, mRNA Partial, 354 nt].
LF357836 - JP 2014500723-A/165339: Polycomb-Associated Non-Coding RNAs.
BC001452 - Homo sapiens cDNA clone IMAGE:3138979, **** WARNING: chimeric clone ****.
JX853577 - Homo sapiens nitric oxide synthase 3 transcript variant eNOS-delta20 mRNA, partial cds, alternatively spliced.
LF357837 - JP 2014500723-A/165340: Polycomb-Associated Non-Coding RNAs.
JX853579 - Homo sapiens nitric oxide synthase 3 transcript variant eNOS-delta20-21 mRNA, partial cds, alternatively spliced.
JX853578 - Homo sapiens nitric oxide synthase 3 transcript variant eNOS-delta21 mRNA, partial cds, alternatively spliced.
JD443484 - Sequence 424508 from Patent EP1572962.
MA593407 - JP 2018138019-A/165333: Polycomb-Associated Non-Coding RNAs.
MA442359 - JP 2018138019-A/14285: Polycomb-Associated Non-Coding RNAs.
MA593409 - JP 2018138019-A/165335: Polycomb-Associated Non-Coding RNAs.
MA593410 - JP 2018138019-A/165336: Polycomb-Associated Non-Coding RNAs.
MA593413 - JP 2018138019-A/165339: Polycomb-Associated Non-Coding RNAs.
MA593414 - JP 2018138019-A/165340: Polycomb-Associated Non-Coding RNAs.

-  Biochemical and Signaling Pathways
  BioCyc Knowledge Library
PWY-4983 - citrulline-nitric oxide cycle

Reactome (by CSHL, EBI, and GO)

Protein P29474 (Reactome details) participates in the following event(s):

R-HSA-203611 N-myristoylation of eNOS
R-HSA-203567 palmitoylation of eNOS
R-HSA-202132 depalmitoylated eNOS translocates from plasma membrane
R-HSA-203613 depalmitoylation of eNOS
R-HSA-203553 eNOS binds NOSIP
R-HSA-203712 eNOS associates with Caveolin-1
R-HSA-418436 Nitric Oxide Synthase (NOS) produces Nitric Oxide (NO)
R-HSA-1497784 The cofactor BH4 is required for electron transfer in the eNOS catalytic cycle
R-HSA-202111 AKT1 phosphorylates eNOS
R-HSA-1497796 BH2 binding can lead to eNOS uncoupling
R-HSA-202137 AKT1 binds eNOS complex via HSP90
R-HSA-202144 Caveolin-1 dissociates from eNOS:CaM:HSP90 complex
R-HSA-202110 eNOS:Caveolin-1 complex binds to CaM
R-HSA-203716 eNOS:Caveolin-1 complex binds to Nostrin
R-HSA-203565 eNOS:Caveolin-1:NOSTRIN:dynamin-2 complex binds N-WASP
R-HSA-203662 eNOS:Caveolin-1:NOSTRIN complex binds dynamin-2
R-HSA-1497810 Uncoupled eNOS favours the formation of superoxide
R-HSA-202129 HSP90 binds eNOS:Caveolin-1:CaM complex
R-HSA-202127 eNOS synthesizes NO
R-HSA-203615 eNOS activation
R-HSA-203765 eNOS activation and regulation
R-HSA-203754 NOSIP mediated eNOS trafficking
R-HSA-392154 Nitric oxide stimulates guanylate cyclase
R-HSA-1222556 ROS, RNS production in phagocytes
R-HSA-202131 Metabolism of nitric oxide
R-HSA-1474151 Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation
R-HSA-5218920 VEGFR2 mediated vascular permeability
R-HSA-203641 NOSTRIN mediated eNOS trafficking
R-HSA-418346 Platelet homeostasis
R-HSA-168249 Innate Immune System
R-HSA-1430728 Metabolism
R-HSA-8978934 Metabolism of cofactors
R-HSA-4420097 VEGFA-VEGFR2 Pathway
R-HSA-109582 Hemostasis
R-HSA-168256 Immune System
R-HSA-196854 Metabolism of vitamins and cofactors
R-HSA-194138 Signaling by VEGF
R-HSA-9006934 Signaling by Receptor Tyrosine Kinases
R-HSA-162582 Signal Transduction

-  Other Names for This Gene
  Alternate Gene Symbols: A0S0A7, A0S0A8, A8KA63, B2RCQ1, E9PFR2, ENST00000297494.1, ENST00000297494.2, ENST00000297494.3, ENST00000297494.4, ENST00000297494.5, ENST00000297494.6, ENST00000297494.7, NM_000603, NOS3 , NOS3_HUMAN, P29474, Q13662, Q14251, Q14434, Q548C1, Q6GSL5, Q9UDC6, uc317mal.1, uc317mal.2
UCSC ID: ENST00000297494.8_5
RefSeq Accession: NM_000603.5
Protein: P29474 (aka NOS3_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.