Human Gene NOX3 (ENST00000159060.3_7) from GENCODE V47lift37
  Description: NADPH oxidase 3 (from RefSeq NM_015718.3)
Gencode Transcript: ENST00000159060.3_7
Gencode Gene: ENSG00000074771.4_9
Transcript (Including UTRs)
   Position: hg19 chr6:155,716,502-155,776,973 Size: 60,472 Total Exon Count: 14 Strand: -
Coding Region
   Position: hg19 chr6:155,717,970-155,776,934 Size: 58,965 Coding Exon Count: 13 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDGene Alleles
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr6:155,716,502-155,776,973)mRNA (may differ from genome)Protein (568 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
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HGNCMGIOMIMPubMedReactomeUniProtKB
WikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: NOX3_HUMAN
DESCRIPTION: RecName: Full=NADPH oxidase 3; EC=1.6.3.-; AltName: Full=Mitogenic oxidase 2; Short=MOX-2; AltName: Full=gp91phox homolog 3; Short=GP91-3;
FUNCTION: NADPH oxidase which constitutively produces superoxide upon formation of a complex with CYBA/p22phox. Plays a role in the biogenesis of otoconia/otolith, which are crystalline structures of the inner ear involved in the perception of gravity.
ENZYME REGULATION: Activated by the ototoxic drug cisplatin (By similarity). Activated by NOXO1. Cooperatively activated by NCF1 and NCF2 or NOXA1 in a phorbol 12-myristate 13-acetate (PMA)- dependent manner. Inhibited by diphenyleneiodonium chloride.
SUBUNIT: Interacts with and stabilizes CYBA/p22phox.
SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein (Potential).
DEVELOPMENTAL STAGE: Expressed in fetal kidney and to a lower extent in liver, lung and spleen.
SIMILARITY: Contains 1 FAD-binding FR-type domain.
SIMILARITY: Contains 1 ferric oxidoreductase domain.

-  Primer design for this transcript
 

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Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
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To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.02 RPKM in Adrenal Gland
Total median expression: 0.18 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -0.5039-0.013 Picture PostScript Text
3' UTR -43.80234-0.187 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000778 - Cyt_b245_heavy_chain
IPR013112 - FAD-bd_8
IPR017927 - Fd_Rdtase_FAD-bd
IPR013130 - Fe3_Rdtase_TM_dom
IPR013121 - Fe_red_NAD-bd_6
IPR017938 - Riboflavin_synthase-like_b-brl

Pfam Domains:
PF01794 - Ferric reductase like transmembrane component
PF08022 - FAD-binding domain
PF08030 - Ferric reductase NAD binding domain

SCOP Domains:
63380 - Riboflavin synthase domain-like
52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain
82856 - L-A virus major coat protein

ModBase Predicted Comparative 3D Structure on Q9HBY0
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0016175 superoxide-generating NADPH oxidase activity
GO:0016491 oxidoreductase activity

Biological Process:
GO:0001659 temperature homeostasis
GO:0009590 detection of gravity
GO:0009629 response to gravity
GO:0042554 superoxide anion generation
GO:0048840 otolith development
GO:0055114 oxidation-reduction process

Cellular Component:
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0043020 NADPH oxidase complex
GO:0070062 extracellular exosome


-  Descriptions from all associated GenBank mRNAs
  HW061139 - JP 2012529430-A/14: METHODS FOR TREATING CHRONIC KIDNEY DISEASE.
JB251947 - Sequence 14 from Patent EP2440214.
LP764846 - Sequence 14 from Patent EP3276004.
AF190122 - Homo sapiens putative superoxide-generating NADPH oxidase Mox2 mRNA, complete cds.
HH837085 - Sequence 12 from Patent EP2231168.
HI214726 - Sequence 12 from Patent EP2076526.
HV601528 - JP 2011500003-A/12: Novel siRNA Structures.
HV856601 - JP 2010507387-A/12: Novel siRNAs and Methods of Use Thereof.
HW165088 - JP 2013102767-A/12: Novel siRNA's and Use Thereof.
HW675596 - JP 2014210789-A/12: Novel siRNA Structures.
HW835284 - JP 2015051004-A/12: Novel siRNA's and Use Thereof.
JA538127 - Sequence 12 from Patent EP2371958.
JD164230 - Sequence 145254 from Patent EP1572962.
JD250799 - Sequence 231823 from Patent EP1572962.
JD091931 - Sequence 72955 from Patent EP1572962.
JD312619 - Sequence 293643 from Patent EP1572962.
BC160172 - Synthetic construct Homo sapiens clone IMAGE:100064204, MGC:193287 NADPH oxidase 3 (NOX3) mRNA, encodes complete protein.
AF229177 - Homo sapiens NADPH oxidase subunit gp91-3 mRNA, partial cds.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q9HBY0 (Reactome details) participates in the following event(s):

R-HSA-5668735 RAC1:GTP binds NOX3 complex
R-HSA-5668731 NOX3 complex:RAC1:GTP generates superoxide from oxygen
R-HSA-5668599 RHO GTPases Activate NADPH Oxidases
R-HSA-195258 RHO GTPase Effectors
R-HSA-194315 Signaling by Rho GTPases
R-HSA-162582 Signal Transduction

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000159060.1, ENST00000159060.2, MOX2, NM_015718, NOX3_HUMAN, Q9HBJ9, Q9HBY0, uc317ccc.1, uc317ccc.2
UCSC ID: ENST00000159060.3_7
RefSeq Accession: NM_015718.3
Protein: Q9HBY0 (aka NOX3_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.