Human Gene PEX14 (ENST00000356607.9_4) from GENCODE V47lift37
  Description: peroxisomal biogenesis factor 14 (from RefSeq NM_004565.3)
Gencode Transcript: ENST00000356607.9_4
Gencode Gene: ENSG00000142655.13_7
Transcript (Including UTRs)
   Position: hg19 chr1:10,535,007-10,690,815 Size: 155,809 Total Exon Count: 9 Strand: +
Coding Region
   Position: hg19 chr1:10,535,024-10,690,044 Size: 155,021 Coding Exon Count: 9 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesGeneReviewsModel Information
Methods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:10,535,007-10,690,815)mRNA (may differ from genome)Protein (377 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedReactome
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: PEX14_HUMAN
DESCRIPTION: RecName: Full=Peroxisomal membrane protein PEX14; AltName: Full=PTS1 receptor-docking protein; AltName: Full=Peroxin-14; AltName: Full=Peroxisomal membrane anchor protein PEX14;
FUNCTION: Component of the peroxisomal translocation machinery with PEX13 and PEX17. Interacts with both the PTS1 and PTS2 receptors. Binds directly to PEX17.
SUBUNIT: Interacts with PEX5 and PEX19.
INTERACTION: P40855:PEX19; NbExp=4; IntAct=EBI-594898, EBI-594747;
SUBCELLULAR LOCATION: Peroxisome membrane; Peripheral membrane protein; Cytoplasmic side.
DISEASE: Defects in PEX14 are the cause of peroxisome biogenesis disorder complementation group K (PBD-CGK) [MIM:601791]. PBD-CGK is a peroxisomal disorder arising from a failure of protein import into the peroxisomal membrane or matrix. The peroxisome biogenesis disorders (PBD group) are genetically heterogeneous with at least 14 distinct genetic groups as concluded from complementation studies. Include disorders are: Zellweger syndrome (ZWS), neonatal adrenoleukodystrophy (NALD), infantile Refsum disease (IRD), and classical rhizomelic chondrodysplasia punctata (RCDP). ZWS, NALD and IRD are distinct from RCDP and constitute a clinical continuum of overlapping phenotypes known as the Zellweger spectrum (PBD- ZSS).
DISEASE: Defects in PEX14 are a cause of Zellweger syndrome (ZWS) [MIM:214100]. ZWS is a fatal peroxisome biogenesis disorder characterized by dysmorphic facial features, hepatomegaly, ocular abnormalities, renal cysts, hearing impairment, profound psychomotor retardation, severe hypotonia and neonatal seizures. Death occurs within the first year of life.
SIMILARITY: Belongs to the peroxin-14 family.
WEB RESOURCE: Name=GeneReviews; URL="http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/PEX14";

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: PEX14
Diseases sorted by gene-association score: peroxisome biogenesis disorder 13a* (919), neonatal adrenoleukodystrophy* (111), peroxisome biogenesis disorder 1b* (97), peroxisome biogenesis disorders, zellweger syndrome spectrum* (60), zellweger syndrome (13), refsum disease (7)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 22.51 RPKM in Bladder
Total median expression: 536.08 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR 0.00170.000 Picture PostScript Text
3' UTR -317.60771-0.412 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR025655 - PEX14
IPR006785 - Pex14_N

Pfam Domains:
PF04695 - Pex14 N-terminal domain

SCOP Domains:
48371 - ARM repeat

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2W84 - NMR MuPIT 2W85 - NMR MuPIT


ModBase Predicted Comparative 3D Structure on O75381
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologGenome Browser
Gene DetailsGene Details Gene Details Gene Details
Gene SorterGene Sorter Gene Sorter Gene Sorter
 RGDEnsembl  SGD
     Protein Sequence
     Alignment

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003714 transcription corepressor activity
GO:0005102 receptor binding
GO:0005515 protein binding
GO:0008017 microtubule binding
GO:0047485 protein N-terminus binding
GO:0048487 beta-tubulin binding

Biological Process:
GO:0006625 protein targeting to peroxisome
GO:0007031 peroxisome organization
GO:0015031 protein transport
GO:0016558 protein import into peroxisome matrix
GO:0016561 protein import into peroxisome matrix, translocation
GO:0016567 protein ubiquitination
GO:0032091 negative regulation of protein binding
GO:0034453 microtubule anchoring
GO:0036250 peroxisome transport along microtubule
GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity
GO:0044721 protein import into peroxisome matrix, substrate release
GO:0045892 negative regulation of transcription, DNA-templated
GO:0051260 protein homooligomerization
GO:0065003 macromolecular complex assembly
GO:1901094 negative regulation of protein homotetramerization

Cellular Component:
GO:0001650 fibrillar center
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005777 peroxisome
GO:0005778 peroxisomal membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0032991 macromolecular complex
GO:1990429 peroxisomal importomer complex


-  Descriptions from all associated GenBank mRNAs
  AK293684 - Homo sapiens cDNA FLJ50455 complete cds, highly similar to Peroxisomal membrane protein PEX14.
AK307416 - Homo sapiens cDNA, FLJ97364.
AK298136 - Homo sapiens cDNA FLJ51918 complete cds, highly similar to Peroxisomal membrane protein PEX14.
AK002194 - Homo sapiens cDNA FLJ11332 fis, clone PLACE1010599, highly similar to Peroxisomal membrane protein PEX14.
BC006327 - Homo sapiens peroxisomal biogenesis factor 14, mRNA (cDNA clone MGC:12767 IMAGE:4138822), complete cds.
BC017848 - Homo sapiens peroxisomal biogenesis factor 14, mRNA (cDNA clone IMAGE:4696946), partial cds.
AK310726 - Homo sapiens cDNA, FLJ17768.
AK313046 - Homo sapiens cDNA, FLJ93521, Homo sapiens peroxisomal biogenesis factor 14 (PEX14), mRNA.
AF045186 - Homo sapiens peroxisomal membrane anchor protein HsPex14p (PEX14) mRNA, complete cds.
AB017546 - Homo sapiens Pex14 mRNA for peroxisomal membrane anchor protein, complete cds.
CU675355 - Synthetic construct Homo sapiens gateway clone IMAGE:100019144 5' read PEX14 mRNA.
AB527589 - Synthetic construct DNA, clone: pF1KB6583, Homo sapiens PEX14 gene for peroxisomal biogenesis factor 14, without stop codon, in Flexi system.
CR450321 - Homo sapiens full open reading frame cDNA clone RZPDo834G031D for gene PEX14, peroxisomal biogenesis factor 14; complete cds; without stopcodon.
DQ895905 - Synthetic construct Homo sapiens clone IMAGE:100010365; FLH189614.01L; RZPDo839H0264D peroxisomal biogenesis factor 14 (PEX14) gene, encodes complete protein.
CR542083 - Homo sapiens full open reading frame cDNA clone RZPDo834B0137D for gene PEX14, peroxisomal biogenesis factor 14; complete cds, incl. stopcodon.
DQ892775 - Synthetic construct clone IMAGE:100005405; FLH189618.01X; RZPDo839H0274D peroxisomal biogenesis factor 14 (PEX14) gene, encodes complete protein.
AK307462 - Homo sapiens cDNA, FLJ97410.
BC054017 - Homo sapiens peroxisomal biogenesis factor 14, mRNA (cDNA clone IMAGE:6739162), partial cds.
JD241985 - Sequence 223009 from Patent EP1572962.
JD423149 - Sequence 404173 from Patent EP1572962.
JD230951 - Sequence 211975 from Patent EP1572962.
JD227000 - Sequence 208024 from Patent EP1572962.
JD414612 - Sequence 395636 from Patent EP1572962.
JD185625 - Sequence 166649 from Patent EP1572962.
JD477550 - Sequence 458574 from Patent EP1572962.
JD322830 - Sequence 303854 from Patent EP1572962.
JD044749 - Sequence 25773 from Patent EP1572962.
JD335886 - Sequence 316910 from Patent EP1572962.
JD525528 - Sequence 506552 from Patent EP1572962.
JD518862 - Sequence 499886 from Patent EP1572962.
JD444488 - Sequence 425512 from Patent EP1572962.
JD409470 - Sequence 390494 from Patent EP1572962.
JD519542 - Sequence 500566 from Patent EP1572962.
JD260851 - Sequence 241875 from Patent EP1572962.
JD475828 - Sequence 456852 from Patent EP1572962.
JD116800 - Sequence 97824 from Patent EP1572962.
JD250418 - Sequence 231442 from Patent EP1572962.
JD106717 - Sequence 87741 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein O75381 (Reactome details) participates in the following event(s):

R-HSA-8953917 PEX2:PEX10:PEX12 binds PEX5S,L (in PEX5S:PEX13:PEX14) and Ub:UBE2D1,2,3
R-HSA-9033516 Ub:PEX5L (in PEX2:PEX10:PEX12:Ub:PEX5L:PEX7:PEX13:PEX14) binds PEX1:PEX6:PEX26 and ZFAND6
R-HSA-9033485 PEX2:PEX10:PEX12 monoubiquitinates PEX5L at cysteine-11
R-HSA-9033527 PEX2:PEX10:PEX12 binds PEX5L (in PEX5L:PEX7:PEX13:PEX14:PEX2:PEX10:PEX12) and Ub:UBE2D1,2,3
R-HSA-9033533 Ub:PEX5S,L (in PEX2:PEX10:PEX12:Ub:PEX5S:PEX13:PEX14) binds PEX1:PEX6:PEX26 and ZFAND6
R-HSA-8953946 PEX2:PEX10:PEX12 monoubiquitinates PEX5S,L at cysteine-11
R-HSA-9033236 PEX5S,L:Cargo binds PEX13:PEX14 of PEX13:PEX14:PEX2:PEX10:PEX12 (Docking and Translocation Complex)
R-HSA-9033238 PEX5L:PEX7:Cargo binds PEX13:PEX14 of PEX13:PEX14:PEX2:PEX10:PEX12 (Docking and Translocation Complex)
R-HSA-8866654 E3 ubiquitin ligases ubiquitinate target proteins
R-HSA-9033241 Peroxisomal protein import
R-HSA-8852135 Protein ubiquitination
R-HSA-392499 Metabolism of proteins
R-HSA-597592 Post-translational protein modification

-  Other Names for This Gene
  Alternate Gene Symbols: B2R7N1, B3KML6, B7Z1N2, ENST00000356607.1, ENST00000356607.2, ENST00000356607.3, ENST00000356607.4, ENST00000356607.5, ENST00000356607.6, ENST00000356607.7, ENST00000356607.8, NM_004565, O75381, PEX14 , PEX14_HUMAN, Q8WX51, uc317zqf.1, uc317zqf.2
UCSC ID: ENST00000356607.9_4
RefSeq Accession: NM_004565.3
Protein: O75381 (aka PEX14_HUMAN or PEXE_HUMAN)

-  GeneReviews for This Gene
  GeneReviews article(s) related to gene PEX14:
pbd (Zellweger Spectrum Disorder)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.