Human Gene PRKCE (ENST00000306156.8_4) from GENCODE V47lift37
  Description: protein kinase C epsilon (from RefSeq NM_005400.3)
Gencode Transcript: ENST00000306156.8_4
Gencode Gene: ENSG00000171132.14_9
Transcript (Including UTRs)
   Position: hg19 chr2:45,878,814-46,415,129 Size: 536,316 Total Exon Count: 15 Strand: +
Coding Region
   Position: hg19 chr2:45,879,240-46,412,020 Size: 532,781 Coding Exon Count: 15 

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RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:45,878,814-46,415,129)mRNA (may differ from genome)Protein (737 aa)
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-  Comments and Description Text from UniProtKB
  ID: KPCE_HUMAN
DESCRIPTION: RecName: Full=Protein kinase C epsilon type; EC=2.7.11.13; AltName: Full=nPKC-epsilon;
FUNCTION: Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays essential roles in the regulation of multiple cellular processes linked to cytoskeletal proteins, such as cell adhesion, motility, migration and cell cycle, functions in neuron growth and ion channel regulation, and is involved in immune response, cancer cell invasion and regulation of apoptosis. Mediates cell adhesion to the extracellular matrix via integrin-dependent signaling, by mediating angiotensin-2-induced activation of integrin beta-1 (ITGB1) in cardiac fibroblasts. Phosphorylates MARCKS, which phosphorylates and activates PTK2/FAK, leading to the spread of cardiomyocytes. Involved in the control of the directional transport of ITGB1 in mesenchymal cells by phosphorylating vimentin (VIM), an intermediate filament (IF) protein. In epithelial cells, associates with and phosphorylates keratin-8 (KRT8), which induces targeting of desmoplakin at desmosomes and regulates cell-cell contact. Phosphorylates IQGAP1, which binds to CDC42, mediating epithelial cell-cell detachment prior to migration. In HeLa cells, contributes to hepatocyte growth factor (HGF)-induced cell migration, and in human corneal epithelial cells, plays a critical role in wound healing after activation by HGF. During cytokinesis, forms a complex with YWHAB, which is crucial for daughter cell separation, and facilitates abscission by a mechanism which may implicate the regulation of RHOA. In cardiac myocytes, regulates myofilament function and excitation coupling at the Z-lines, where it is indirectly associated with F- actin via interaction with COPB1. During endothelin-induced cardiomyocyte hypertrophy, mediates activation of PTK2/FAK, which is critical for cardiomyocyte survival and regulation of sarcomere length. Plays a role in the pathogenesis of dilated cardiomyopathy via persistent phosphorylation of troponin I (TNNI3). Involved in nerve growth factor (NFG)-induced neurite outgrowth and neuron morphological change independently of its kinase activity, by inhibition of RHOA pathway, activation of CDC42 and cytoskeletal rearrangement. May be involved in presynaptic facilitation by mediating phorbol ester-induced synaptic potentiation. Phosphorylates gamma-aminobutyric acid receptor subunit gamma-2 (GABRG2), which reduces the response of GABA receptors to ethanol and benzodiazepines and may mediate acute tolerance to the intoxicating effects of ethanol. Upon PMA treatment, phosphorylates the capsaicin- and heat-activated cation channel TRPV1, which is required for bradykinin-induced sensitization of the heat response in nociceptive neurons. Is able to form a complex with PDLIM5 and N-type calcium channel, and may enhance channel activities and potentiates fast synaptic transmission by phosphorylating the pore-forming alpha subunit CACNA1B (CaV2.2). In prostate cancer cells, interacts with and phosphorylates STAT3, which increases DNA-binding and transcriptional activity of STAT3 and seems to be essential for prostate cancer cell invasion. Downstream of TLR4, plays an important role in the lipopolysaccharide (LPS)-induced immune response by phosphorylating and activating TICAM2/TRAM, which in turn activates the transcription factor IRF3 and subsequent cytokines production. In differentiating erythroid progenitors, is regulated by EPO and controls the protection against the TNFSF10/TRAIL- mediated apoptosis, via BCL2. May be involved in the regulation of the insulin-induced phosphorylation and activation of AKT1.
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
ENZYME REGULATION: Novel PKCs (PRKCD, PRKCE, PRKCH and PRKCQ) are calcium-insensitive, but activated by diacylglycerol (DAG) and phosphatidylserine. Three specific sites; Thr-566 (activation loop of the kinase domain), Thr-710 (turn motif) and Ser-729 (hydrophobic region), need to be phosphorylated for its full activation.
SUBUNIT: Forms a ternary complex with TRIM63 and GN2BL1. Can form a complex with PDLIM5 and N-type calcium channel. Interacts with COPB1 and YWHAB (By similarity). Interacts with DGKQ and STAT3.
SUBCELLULAR LOCATION: Cytoplasm. Cytoplasm, cytoskeleton. Cell membrane. Cytoplasm, perinuclear region (By similarity). Nucleus (By similarity). Note=Translocated to plasma membrane in epithelial cells stimulated by HGF. Associated with the Golgi at the perinuclear site in pre-passage fibroblasts (By similarity). In passaging cells, translocated to the cell periphery (By similarity). Translocated to the nucleus in PMA-treated cells (By similarity).
DOMAIN: The C1 domain, containing the phorbol ester/DAG-type region 1 (C1A) and 2 (C1B), is the diacylglycerol sensor and the C2 domain is a non-calcium binding domain.
PTM: Phosphorylation on Thr-566 by PDPK1 triggers autophosphorylation on Ser-729. Phosphorylation in the hinge domain at Ser-350 by MAPK11 or MAPK14, Ser-346 by GSK3B and Ser- 368 by autophosphorylation is required for interaction with YWHAB.
SIMILARITY: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
SIMILARITY: Contains 1 AGC-kinase C-terminal domain.
SIMILARITY: Contains 1 C2 domain.
SIMILARITY: Contains 2 phorbol-ester/DAG-type zinc fingers.
SIMILARITY: Contains 1 protein kinase domain.

-  Primer design for this transcript
 

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-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 14.48 RPKM in Brain - Frontal Cortex (BA9)
Total median expression: 145.71 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -203.60426-0.478 Picture PostScript Text
3' UTR -866.903109-0.279 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000961 - AGC-kinase_C
IPR000008 - C2_Ca-dep
IPR008973 - C2_Ca/lipid-bd_dom_CaLB
IPR018029 - C2_membr_targeting
IPR020454 - DAG/PE-bd
IPR011009 - Kinase-like_dom
IPR017892 - Pkinase_C
IPR014376 - Prot_kin_PKC_delta
IPR002219 - Prot_Kinase_C-like_PE/DAG-bd
IPR000719 - Prot_kinase_cat_dom
IPR017441 - Protein_kinase_ATP_BS
IPR002290 - Ser/Thr_dual-sp_kinase_dom
IPR008271 - Ser/Thr_kinase_AS

Pfam Domains:
PF00069 - Protein kinase domain
PF00130 - Phorbol esters/diacylglycerol binding domain (C1 domain)
PF00168 - C2 domain
PF00433 - Protein kinase C terminal domain
PF07714 - Protein tyrosine and serine/threonine kinase

SCOP Domains:
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
56112 - Protein kinase-like (PK-like)
57889 - Cysteine-rich domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2WH0 - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on Q02156
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologGenome Browser
Gene DetailsGene Details Gene DetailsGene DetailsGene Details
Gene SorterGene Sorter Gene SorterGene SorterGene Sorter
 RGDEnsembl WormBaseSGD
     Protein Sequence
     Alignment

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0003785 actin monomer binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0004697 protein kinase C activity
GO:0004699 calcium-independent protein kinase C activity
GO:0004871 signal transducer activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008047 enzyme activator activity
GO:0016301 kinase activity
GO:0016740 transferase activity
GO:0019899 enzyme binding
GO:0030546 receptor activator activity
GO:0035276 ethanol binding
GO:0046872 metal ion binding
GO:0071889 14-3-3 protein binding

Biological Process:
GO:0002281 macrophage activation involved in immune response
GO:0002376 immune system process
GO:0006468 protein phosphorylation
GO:0006915 apoptotic process
GO:0007049 cell cycle
GO:0007155 cell adhesion
GO:0007165 signal transduction
GO:0010634 positive regulation of epithelial cell migration
GO:0010763 positive regulation of fibroblast migration
GO:0010811 positive regulation of cell-substrate adhesion
GO:0016310 phosphorylation
GO:0018105 peptidyl-serine phosphorylation
GO:0019216 regulation of lipid metabolic process
GO:0030168 platelet activation
GO:0030838 positive regulation of actin filament polymerization
GO:0031397 negative regulation of protein ubiquitination
GO:0031663 lipopolysaccharide-mediated signaling pathway
GO:0032024 positive regulation of insulin secretion
GO:0032230 positive regulation of synaptic transmission, GABAergic
GO:0032467 positive regulation of cytokinesis
GO:0035556 intracellular signal transduction
GO:0035641 locomotory exploration behavior
GO:0035669 TRAM-dependent toll-like receptor 4 signaling pathway
GO:0038096 Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0043085 positive regulation of catalytic activity
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043278 response to morphine
GO:0043410 positive regulation of MAPK cascade
GO:0050730 regulation of peptidyl-tyrosine phosphorylation
GO:0050996 positive regulation of lipid catabolic process
GO:0051209 release of sequestered calcium ion into cytosol
GO:0051279 regulation of release of sequestered calcium ion into cytosol
GO:0051301 cell division
GO:0061178 regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0070257 positive regulation of mucus secretion
GO:0071361 cellular response to ethanol
GO:0071380 cellular response to prostaglandin E stimulus
GO:0071456 cellular response to hypoxia
GO:0090303 positive regulation of wound healing
GO:1903078 positive regulation of protein localization to plasma membrane
GO:2000273 positive regulation of receptor activity
GO:2000650 negative regulation of sodium ion transmembrane transporter activity
GO:2001031 positive regulation of cellular glucuronidation

Cellular Component:
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005783 endoplasmic reticulum
GO:0005794 Golgi apparatus
GO:0005829 cytosol
GO:0005856 cytoskeleton
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0048471 perinuclear region of cytoplasm
GO:0071944 cell periphery


-  Descriptions from all associated GenBank mRNAs
  AL832345 - Homo sapiens mRNA; cDNA DKFZp451P195 (from clone DKFZp451P195).
BC109033 - Homo sapiens protein kinase C, epsilon, mRNA (cDNA clone MGC:125656 IMAGE:40028213), complete cds.
BC109034 - Homo sapiens protein kinase C, epsilon, mRNA (cDNA clone MGC:125657 IMAGE:40028215), complete cds.
AK313842 - Homo sapiens cDNA, FLJ94469, highly similar to Homo sapiens protein kinase C, epsilon (PRKCE), mRNA.
X65293 - H.sapiens mRNA for protein kinase C-Epsilon.
KJ891889 - Synthetic construct Homo sapiens clone ccsbBroadEn_01283 PRKCE gene, encodes complete protein.
AB385570 - Synthetic construct DNA, clone: pF1KB9425, Homo sapiens PRKCE gene for protein kinase C epsilon type, complete cds, without stop codon, in Flexi system.
BC029576 - Homo sapiens cDNA clone IMAGE:5267735.
AK128749 - Homo sapiens cDNA FLJ44698 fis, clone BRACE3015898.
JD530128 - Sequence 511152 from Patent EP1572962.
BC051195 - Homo sapiens protein kinase C, epsilon, mRNA (cDNA clone IMAGE:5276612).
BC054052 - Homo sapiens protein kinase C, epsilon, mRNA (cDNA clone IMAGE:4471213), partial cds.

-  Biochemical and Signaling Pathways
  BioCarta from NCI Cancer Genome Anatomy Project
h_flumazenilPathway - Cardiac Protection Against ROS
h_akapCentrosomePathway - Protein Kinase A at the Centrosome
h_keratinocytePathway - Keratinocyte Differentiation
h_ptdinsPathway - Phosphoinositides and their downstream targets.

Reactome (by CSHL, EBI, and GO)

Protein Q02156 (Reactome details) participates in the following event(s):

R-HSA-198314 DAG stimulates protein kinase C-delta
R-HSA-425861 Activation of Protein Kinase C novel isoforms
R-HSA-8982703 PKC binds active G alpha (z)
R-HSA-8982709 G-alpha(z):PKC dissociates to give phosphorylated G alpha (z)
R-HSA-8934446 Activated PKC phosphorylates SHC1
R-HSA-751040 PKC phosphorylates G alpha (z)
R-HSA-1489509 DAG and IP3 signaling
R-HSA-2029485 Role of phospholipids in phagocytosis
R-HSA-114508 Effects of PIP2 hydrolysis
R-HSA-9006925 Intracellular signaling by second messengers
R-HSA-2029480 Fcgamma receptor (FCGR) dependent phagocytosis
R-HSA-76002 Platelet activation, signaling and aggregation
R-HSA-416476 G alpha (q) signalling events
R-HSA-162582 Signal Transduction
R-HSA-168249 Innate Immune System
R-HSA-418597 G alpha (z) signalling events
R-HSA-109582 Hemostasis
R-HSA-388396 GPCR downstream signalling
R-HSA-1250196 SHC1 events in ERBB2 signaling
R-HSA-168256 Immune System
R-HSA-372790 Signaling by GPCR
R-HSA-1227986 Signaling by ERBB2
R-HSA-9006934 Signaling by Receptor Tyrosine Kinases

-  Other Names for This Gene
  Alternate Gene Symbols: B0LPH7, ENST00000306156.1, ENST00000306156.2, ENST00000306156.3, ENST00000306156.4, ENST00000306156.5, ENST00000306156.6, ENST00000306156.7, KPCE_HUMAN, NM_005400, PKCE, Q02156, Q32MQ3, Q53SL4, Q53SM5, Q9UE81, uc317nub.1, uc317nub.2
UCSC ID: ENST00000306156.8_4
RefSeq Accession: NM_005400.3
Protein: Q02156 (aka KPCE_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.