Human Gene RPL13AP20 (ENST00000459725.1

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Human Gene RPL13AP20 (ENST00000459725.1_2) from GENCODE V47lift37

Description: ribosomal protein L13a pseudogene 20 (from RefSeq NR_003932.2)
Gencode Transcript: ENST00000459725.1_2
Gencode Gene: ENSG00000234498.3_6
Transcript (Including UTRs)
Position: hg19 chr12:13,028,433-13,029,041 Size: 609 Total Exon Count: 1 Strand: +

Page Index	Sequence and Links	Primers	CTD	RNA-Seq Expression	Other Species
mRNA Descriptions	Other Names	Model Information	Methods

Data last updated at UCSC: 2024-08-22 23:36:26

Sequence and Links to Tools and Databases

Genomic Sequence (chr12:13,028,433-13,029,041)			mRNA (may differ from genome)		No protein
Gene Sorter	Genome Browser	Other Species FASTA	Gene interactions	Table Schema	BioGPS
Ensembl	Entrez Gene	ExonPrimer	HGNC	PubMed	BioGrid CRISPR DB

Primer design for this transcript

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3

Comparative Toxicogenomics Database (CTD)


	The following chemicals interact with this gene D004958 Estradiol

RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)


	Highest median expression: 0.96 RPKM in Thyroid Total median expression: 12.11 RPKM View in GTEx track of Genome Browser View at GTEx portal View GTEx Body Map

Orthologous Genes in Other Species

Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.

Mouse	Rat	Zebrafish	D. melanogaster	C. elegans	S. cerevisiae
No ortholog	No ortholog	No ortholog	No ortholog	No ortholog	No ortholog

Descriptions from all associated GenBank mRNAs


	JD404540 - Sequence 385564 from Patent EP1572962. JD055804 - Sequence 36828 from Patent EP1572962. JD439403 - Sequence 420427 from Patent EP1572962. JD386490 - Sequence 367514 from Patent EP1572962.

Other Names for This Gene


	Alternate Gene Symbols: NR_003932, uc321atd.1 UCSC ID: ENST00000459725.1_2 RefSeq Accession: NR_003932.2

Gene Model Information


	Click here for a detailed description of the fields of the table above.

Methods, Credits, and Use Restrictions


	Click here for details on how this gene model was made and data restrictions if any.