Human Gene RPL24 (ENST00000394077.8_8) from GENCODE V47lift37
  Description: ribosomal protein L24 (from RefSeq NM_000986.4)
Gencode Transcript: ENST00000394077.8_8
Gencode Gene: ENSG00000114391.14_10
Transcript (Including UTRs)
   Position: hg19 chr3:101,399,935-101,405,562 Size: 5,628 Total Exon Count: 6 Strand: -
Coding Region
   Position: hg19 chr3:101,399,979-101,405,520 Size: 5,542 Coding Exon Count: 6 

Page IndexSequence and LinksPrimersMalaCardsCTDGene Alleles
RNA-Seq ExpressionMicroarray ExpressionRNA StructureOther SpeciesmRNA DescriptionsOther Names
Model InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr3:101,399,935-101,405,562)mRNA (may differ from genome)Protein (157 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedUniProtKB
WikipediaBioGrid CRISPR DB

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: RPL24
Diseases sorted by gene-association score: bone resorption disease (2), bone remodeling disease (2), cauda equina neoplasm (1)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 884.08 RPKM in Ovary
Total median expression: 17965.69 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -1.6042-0.038 Picture PostScript Text
3' UTR -3.1044-0.070 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGDEnsembl   
      
      

-  Descriptions from all associated GenBank mRNAs
  BC070193 - Homo sapiens ribosomal protein L24, mRNA (cDNA clone MGC:88174 IMAGE:6733162), complete cds.
M94314 - Homo sapiens ribosomal protein L30 mRNA, complete cds.
BC000690 - Homo sapiens ribosomal protein L24, mRNA (cDNA clone MGC:2240 IMAGE:3349215), complete cds.
EU668341 - Homo sapiens epididymis secretory protein Li 310 (HEL-S-310) mRNA, complete cds.
KJ892033 - Synthetic construct Homo sapiens clone ccsbBroadEn_01427 RPL24 gene, encodes complete protein.
CR456729 - Homo sapiens full open reading frame cDNA clone RZPDo834E036D for gene RPL24, ribosomal protein L24; complete cds, incl. stopcodon.
AK311992 - Homo sapiens cDNA, FLJ92265, Homo sapiens ribosomal protein L24 (RPL24), mRNA.
DQ892621 - Synthetic construct clone IMAGE:100005251; FLH188387.01X; RZPDo839B1073D ribosomal protein L24 (RPL24) gene, encodes complete protein.
DQ895861 - Synthetic construct Homo sapiens clone IMAGE:100010321; FLH188383.01L; RZPDo839B1063D ribosomal protein L24 (RPL24) gene, encodes complete protein.
JD024479 - Sequence 5503 from Patent EP1572962.
JD029023 - Sequence 10047 from Patent EP1572962.
JD137785 - Sequence 118809 from Patent EP1572962.
LF319864 - JP 2014500723-A/127367: Polycomb-Associated Non-Coding RNAs.
JD024690 - Sequence 5714 from Patent EP1572962.
JD027839 - Sequence 8863 from Patent EP1572962.
JD548653 - Sequence 529677 from Patent EP1572962.
D28400 - Homo sapiens mRNA for ribosomal protein L24, partial cds.
MA555441 - JP 2018138019-A/127367: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000394077.1, ENST00000394077.2, ENST00000394077.3, ENST00000394077.4, ENST00000394077.5, ENST00000394077.6, ENST00000394077.7, HEL-S-310 , NM_000986, uc318wiy.1, uc318wiy.2, V9HW01, V9HW01_HUMAN
UCSC ID: ENST00000394077.8_8
RefSeq Accession: NM_000986.4

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.