The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Pfam Domains: PF04939 - Ribosome biogenesis regulatory protein (RRS1)
ModBase Predicted Comparative 3D Structure on Q15050
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Biological Process: GO:0000027 ribosomal large subunit assembly GO:0000055 ribosomal large subunit export from nucleus GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0002244 hematopoietic progenitor cell differentiation GO:0007080 mitotic metaphase plate congression GO:0042254 ribosome biogenesis GO:0042273 ribosomal large subunit biogenesis GO:1901796 regulation of signal transduction by p53 class mediator GO:1902570 protein localization to nucleolus
US Server
Sequence and Links to Tools and Databases 
Common Gene Haplotype Alleles 
