Human Gene TAOK2 (ENST00000308893.9_7) from GENCODE V47lift37
  Description: TAO kinase 2, transcript variant 1 (from RefSeq NM_016151.4)
Gencode Transcript: ENST00000308893.9_7
Gencode Gene: ENSG00000149930.18_10
Transcript (Including UTRs)
   Position: hg19 chr16:29,985,189-29,999,714 Size: 14,526 Total Exon Count: 16 Strand: +
Coding Region
   Position: hg19 chr16:29,989,094-29,999,301 Size: 10,208 Coding Exon Count: 15 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDGene Alleles
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:29,985,189-29,999,714)mRNA (may differ from genome)Protein (1235 aa)
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-  Comments and Description Text from UniProtKB
  ID: TAOK2_HUMAN
DESCRIPTION: RecName: Full=Serine/threonine-protein kinase TAO2; EC=2.7.11.1; AltName: Full=Kinase from chicken homolog C; Short=hKFC-C; AltName: Full=Prostate-derived sterile 20-like kinase 1; Short=PSK-1; Short=PSK1; Short=Prostate-derived STE20-like kinase 1; AltName: Full=Thousand and one amino acid protein kinase 2;
FUNCTION: Serine/threonine-protein kinase involved in different processes such as membrane blebbing and apoptotic bodies formation DNA damage response and MAPK14/p38 MAPK stress-activated MAPK cascade. Phosphorylates itself, MBP, activated MAPK8, MAP2K3, MAP2K6 and tubulins. Activates the MAPK14/p38 MAPK signaling pathway through the specific activation and phosphorylation of the upstream MAP2K3 and MAP2K6 kinases. In response to DNA damage, involved in the G2/M transition DNA damage checkpoint by activating the p38/MAPK14 stress-activated MAPK cascade, probably by mediating phosphorylation of upstream MAP2K3 and MAP2K6 kinases. Isoform 1, but not isoform 2, plays a role in apoptotic morphological changes, including cell contraction, membrane blebbing and apoptotic bodies formation. This function, which requires the activation of MAPK8/JNK and nuclear localization of C-terminally truncated isoform 1, may be linked to the mitochondrial CASP9-associated death pathway. Isoform 1 binds to microtubules and affects their organization and stability independently of its kinase activity. Prevents MAP3K7-mediated activation of CHUK, and thus NF-kappa-B activation, but not that of MAPK8/JNK. May play a role in the osmotic stress-MAPK8 pathway. Isoform 2, but not isoform 1, is required for PCDH8 endocytosis. Following homophilic interactions between PCDH8 extracellular domains, isoform 2 phosphorylates and activates MAPK14/p38 MAPK which in turn phosphorylates isoform 2. This process leads to PCDH8 endocytosis and CDH2 cointernalization. Both isoforms are involved in MAPK14 phosphorylation.
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
COFACTOR: Magnesium (By similarity).
ENZYME REGULATION: Selectively inhibited by the enantiopure organoruthenium inhibitor 9E1. Activated following arsenic trioxide (As(2)O(3)) treatment.
SUBUNIT: Interacts with MAP2K3 and MAP2K6 (By similarity). Self- associates. Interacts with tubulins through the C-terminal domain. Interacts with MAP3K7 and interfers with MAP3K7-binding to CHUK and thus prevents NF-kappa-B activation. Isoform 2 interacts with PCDH8; this complex may also include CDH2 (By similarity).
SUBCELLULAR LOCATION: Cytoplasmic vesicle membrane; Multi-pass membrane protein (Potential). Cytoplasm, cytoskeleton. Nucleus. Note=Catalytically active full-length phosphorylated isoform 1 localizes to microtubules in the cytoplasm predominantly on microtubule cables positioned around the nucleus. A C-terminally truncated form of isoform 1 is present in the nucleus; isoform 2 and kinase-defective, as well as full-length isoform 1 are excluded from the nucleus.
SUBCELLULAR LOCATION: Isoform 2: Cell projection, dendrite. Note=In dendrites, colocalizes with PCDH8 (By similarity).
TISSUE SPECIFICITY: Ubiquitously expressed, with a higher level of expression in testis and brain.
PTM: Isoforms 1 and 2 are autophosphorylated.
PTM: C-terminal cleavage of isoform 1 and subsequent nuclear localization requires CASP9 activity.
PTM: Isoform 2 is phosphorylated at 'Ser-1031' by MAPK14. This phosphorylation is required PCDH8 for endocytosis (By similarity). Autophosphorylated. Phosphorylated by ATM.
SIMILARITY: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
SIMILARITY: Contains 1 protein kinase domain.
SEQUENCE CAUTION: Sequence=AAQ89301.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=BAA74904.2; Type=Erroneous initiation; Note=Translation N-terminally shortened;

-  Primer design for this transcript
 

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Click here to load the transcript sequence and exon structure into Primer3Plus

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Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 24.49 RPKM in Testis
Total median expression: 639.83 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -372.40816-0.456 Picture PostScript Text
3' UTR -99.80413-0.242 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011009 - Kinase-like_dom
IPR000719 - Prot_kinase_cat_dom
IPR017441 - Protein_kinase_ATP_BS
IPR002290 - Ser/Thr_dual-sp_kinase_dom
IPR008271 - Ser/Thr_kinase_AS

Pfam Domains:
PF00069 - Protein kinase domain
PF07714 - Protein tyrosine and serine/threonine kinase

SCOP Domains:
48371 - ARM repeat
56112 - Protein kinase-like (PK-like)

ModBase Predicted Comparative 3D Structure on Q9UL54
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0004709 MAP kinase kinase kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016740 transferase activity
GO:0031434 mitogen-activated protein kinase kinase binding
GO:0038191 neuropilin binding

Biological Process:
GO:0000186 activation of MAPKK activity
GO:0000187 activation of MAPK activity
GO:0001558 regulation of cell growth
GO:0006468 protein phosphorylation
GO:0006612 protein targeting to membrane
GO:0006915 apoptotic process
GO:0006974 cellular response to DNA damage stimulus
GO:0007095 mitotic G2 DNA damage checkpoint
GO:0007257 activation of JUN kinase activity
GO:0007346 regulation of mitotic cell cycle
GO:0007399 nervous system development
GO:0007409 axonogenesis
GO:0008360 regulation of cell shape
GO:0016310 phosphorylation
GO:0016477 cell migration
GO:0030036 actin cytoskeleton organization
GO:0031954 positive regulation of protein autophosphorylation
GO:0032147 activation of protein kinase activity
GO:0032874 positive regulation of stress-activated MAPK cascade
GO:0032956 regulation of actin cytoskeleton organization
GO:0042981 regulation of apoptotic process
GO:0046330 positive regulation of JNK cascade
GO:0046777 protein autophosphorylation
GO:0048041 focal adhesion assembly
GO:0051403 stress-activated MAPK cascade

Cellular Component:
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005856 cytoskeleton
GO:0015629 actin cytoskeleton
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0030424 axon
GO:0030425 dendrite
GO:0030659 cytoplasmic vesicle membrane
GO:0031410 cytoplasmic vesicle
GO:0042995 cell projection
GO:0043005 neuron projection
GO:0043235 receptor complex
GO:0044294 dendritic growth cone
GO:0044295 axonal growth cone


-  Descriptions from all associated GenBank mRNAs
  BC015204 - Homo sapiens TAO kinase 2, mRNA (cDNA clone IMAGE:3878048), partial cds.
BC054495 - Homo sapiens TAO kinase 2, mRNA (cDNA clone IMAGE:6204914).
JD199234 - Sequence 180258 from Patent EP1572962.
AF061943 - Homo sapiens prostate derived STE20-like kinase PSK mRNA, complete cds.
JD057573 - Sequence 38597 from Patent EP1572962.
JD440446 - Sequence 421470 from Patent EP1572962.
JD436369 - Sequence 417393 from Patent EP1572962.
JD065561 - Sequence 46585 from Patent EP1572962.
JD514379 - Sequence 495403 from Patent EP1572962.
BC051798 - Homo sapiens TAO kinase 2, mRNA (cDNA clone IMAGE:5736650), partial cds.
JD358379 - Sequence 339403 from Patent EP1572962.
JD141271 - Sequence 122295 from Patent EP1572962.
JD436258 - Sequence 417282 from Patent EP1572962.
JD062707 - Sequence 43731 from Patent EP1572962.
JD371391 - Sequence 352415 from Patent EP1572962.
BC144344 - Homo sapiens TAO kinase 2, mRNA (cDNA clone MGC:177881 IMAGE:9052864), complete cds.
BC136653 - Homo sapiens TAO kinase 2, mRNA (cDNA clone MGC:168266 IMAGE:9020643), complete cds.
BC136655 - Homo sapiens TAO kinase 2, mRNA (cDNA clone MGC:168268 IMAGE:9020645), complete cds.
JD369293 - Sequence 350317 from Patent EP1572962.
JD510379 - Sequence 491403 from Patent EP1572962.
JD153723 - Sequence 134747 from Patent EP1572962.
AB020688 - Homo sapiens KIAA0881 mRNA for KIAA0881 protein.
BC152413 - Homo sapiens TAO kinase 2, mRNA (cDNA clone MGC:176639 IMAGE:8862518), complete cds.
AK291473 - Homo sapiens cDNA FLJ77457 complete cds, highly similar to Homo sapiens TAO kinase 2 (TAOK2), transcript variant 1, mRNA.
BC142663 - Homo sapiens TAO kinase 2, mRNA (cDNA clone MGC:164910 IMAGE:40148112), complete cds.
BC151221 - Homo sapiens TAO kinase 2, mRNA (cDNA clone MGC:165021 IMAGE:40148752), complete cds.
JD450342 - Sequence 431366 from Patent EP1572962.
JD390703 - Sequence 371727 from Patent EP1572962.
BC031825 - Homo sapiens TAO kinase 2, mRNA (cDNA clone IMAGE:4944200), partial cds.
JD210289 - Sequence 191313 from Patent EP1572962.
AB384030 - Synthetic construct DNA, clone: pF1KSDA0881, Homo sapiens TAOK2 gene for serine/threonine-protein kinase TAO2, complete cds, without stop codon, in Flexi system.
AF263313 - Homo sapiens STE20-like kinase mRNA, partial cds.
AL137701 - Homo sapiens mRNA; cDNA DKFZp434N1427 (from clone DKFZp434N1427); partial cds.
AK304446 - Homo sapiens cDNA FLJ56606 complete cds, highly similar to Serine/threonine-protein kinase TAO2 (EC 2.7.11.1).
AY358942 - Homo sapiens clone DNA119542 PSK (UNQ2971) mRNA, complete cds.
JD473137 - Sequence 454161 from Patent EP1572962.
JD456390 - Sequence 437414 from Patent EP1572962.
JD188316 - Sequence 169340 from Patent EP1572962.
JD227124 - Sequence 208148 from Patent EP1572962.
JD521319 - Sequence 502343 from Patent EP1572962.
JD499551 - Sequence 480575 from Patent EP1572962.
JD231058 - Sequence 212082 from Patent EP1572962.
JD209582 - Sequence 190606 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A5PKY1, A7MCZ2, B2RN35, B7ZM88, ENST00000308893.1, ENST00000308893.2, ENST00000308893.3, ENST00000308893.4, ENST00000308893.5, ENST00000308893.6, ENST00000308893.7, ENST00000308893.8, KIAA0881, MAP3K17, NM_016151, O94957, PSK, PSK1, Q6UW73, Q7LC09, Q9NSW2, Q9UL54, TAOK2_HUMAN, uc317okd.1, uc317okd.2, UNQ2971/PRO7431
UCSC ID: ENST00000308893.9_7
RefSeq Accession: NM_016151.4
Protein: Q9UL54 (aka TAOK2_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.