Human Gene TAOK3 (ENST00000392533.8_7) from GENCODE V47lift37
  Description: TAO kinase 3, transcript variant 2 (from RefSeq NM_016281.4)
Gencode Transcript: ENST00000392533.8_7
Gencode Gene: ENSG00000135090.14_14
Transcript (Including UTRs)
   Position: hg19 chr12:118,587,606-118,810,712 Size: 223,107 Total Exon Count: 21 Strand: -
Coding Region
   Position: hg19 chr12:118,588,802-118,693,372 Size: 104,571 Coding Exon Count: 19 

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Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr12:118,587,606-118,810,712)mRNA (may differ from genome)Protein (898 aa)
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BioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: TAOK3_HUMAN
DESCRIPTION: RecName: Full=Serine/threonine-protein kinase TAO3; EC=2.7.11.1; AltName: Full=Cutaneous T-cell lymphoma-associated antigen HD-CL-09; Short=CTCL-associated antigen HD-CL-09; AltName: Full=Dendritic cell-derived protein kinase; AltName: Full=JNK/SAPK-inhibitory kinase; AltName: Full=Jun kinase-inhibitory kinase; AltName: Full=Kinase from chicken homolog A; Short=hKFC-A; AltName: Full=Thousand and one amino acid protein 3;
FUNCTION: Serine/threonine-protein kinase that acts as a regulator of the p38/MAPK14 stress-activated MAPK cascade and of the MAPK8/JNK cascade. Acts as an activator of the p38/MAPK14 stress- activated MAPK cascade. In response to DNA damage, involved in the G2/M transition DNA damage checkpoint by activating the p38/MAPK14 stress-activated MAPK cascade, probably by mediating phosphorylation of upstream MAP2K3 and MAP2K6 kinases. Inhibits basal activity of MAPK8/JNK cascade and diminishes its activation in response epidermal growth factor (EGF).
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
SUBUNIT: Self-associates. Interacts with ERN1 and TRAF2. Interaction with TRAF2 is facilitated under ER stress conditions, such as treatment with tunicamycin, and may promote TRAF2 phosphorylation.
INTERACTION: O75460:ERN1; NbExp=3; IntAct=EBI-1384100, EBI-371750; Q12933:TRAF2; NbExp=2; IntAct=EBI-1384100, EBI-355744;
SUBCELLULAR LOCATION: Cytoplasm. Cell membrane; Peripheral membrane protein. Note=Also localized to the peripheral cell membrane.
TISSUE SPECIFICITY: Ubiquitously expressed at a low level, and highly expressed in peripheral blood leukocytes (PBLs), thymus, spleen, kidney, skeletal muscle, heart and liver.
PTM: Autophosphorylated. Phosphorylated upon DNA damage, probably by ATM or ATR. Phosphorylation at Ser-324 by ATM following DNA damage is required for activation of the p38/MAPK14 stress- activated MAPK cascade. Phosphorylated by LRRK2.
SIMILARITY: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
SIMILARITY: Contains 1 protein kinase domain.
SEQUENCE CAUTION: Sequence=AAN09723.1; Type=Erroneous initiation; Note=Translation N-terminally extended;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: TAOK3
Diseases sorted by gene-association score: cardiomyopathy, familial hypertrophic, 9 (3), charcot-marie-tooth disease, axonal, type 2l (1)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 18.87 RPKM in Brain - Cerebellar Hemisphere
Total median expression: 401.17 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -146.20453-0.323 Picture PostScript Text
3' UTR -254.901196-0.213 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011009 - Kinase-like_dom
IPR000719 - Prot_kinase_cat_dom
IPR017441 - Protein_kinase_ATP_BS
IPR002290 - Ser/Thr_dual-sp_kinase_dom
IPR008271 - Ser/Thr_kinase_AS

Pfam Domains:
PF00069 - Protein kinase domain
PF07714 - Protein tyrosine and serine/threonine kinase

SCOP Domains:
56112 - Protein kinase-like (PK-like)

ModBase Predicted Comparative 3D Structure on Q9H2K8
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0004709 MAP kinase kinase kinase activity
GO:0004860 protein kinase inhibitor activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016740 transferase activity

Biological Process:
GO:0000165 MAPK cascade
GO:0000186 activation of MAPKK activity
GO:0006281 DNA repair
GO:0006468 protein phosphorylation
GO:0006469 negative regulation of protein kinase activity
GO:0006974 cellular response to DNA damage stimulus
GO:0007095 mitotic G2 DNA damage checkpoint
GO:0007399 nervous system development
GO:0016310 phosphorylation
GO:0032874 positive regulation of stress-activated MAPK cascade
GO:0042981 regulation of apoptotic process
GO:0043507 positive regulation of JUN kinase activity
GO:0046329 negative regulation of JNK cascade
GO:0046330 positive regulation of JNK cascade
GO:0046777 protein autophosphorylation

Cellular Component:
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0016020 membrane


-  Descriptions from all associated GenBank mRNAs
  AF181985 - Homo sapiens serine/threonine kinase (KDS) mRNA, complete cds.
AL833460 - Homo sapiens mRNA; cDNA DKFZp686M18116 (from clone DKFZp686M18116).
AF161373 - Homo sapiens HSPC255 mRNA, partial cds.
AF328731 - Homo sapiens CTCL tumor antigen HD-CL-09 mRNA, complete cds.
AF179867 - Homo sapiens STE20-like kinase (JIK) mRNA, complete cds.
AF135158 - Homo sapiens serine kinase mRNA, complete cds.
BC002756 - Homo sapiens TAO kinase 3, mRNA (cDNA clone MGC:3364 IMAGE:3630338), complete cds.
AK056370 - Homo sapiens cDNA FLJ31808 fis, clone NT2RI2009269, highly similar to Serine/threonine-protein kinase TAO3 (EC 2.7.11.1).
AL833731 - Homo sapiens mRNA; cDNA DKFZp666H245 (from clone DKFZp666H245).
AK289558 - Homo sapiens cDNA FLJ76732 complete cds, highly similar to Homo sapiens TAO kinase 3 (TAOK3), mRNA.
KJ905472 - Synthetic construct Homo sapiens clone ccsbBroadEn_15065 TAOK3 gene, encodes complete protein.
BT007185 - Homo sapiens STE20-like kinase mRNA, complete cds.
DQ890696 - Synthetic construct clone IMAGE:100003326; FLH165227.01X; RZPDo839H07158D TAO kinase 3 (TAOK3) gene, encodes complete protein.
DQ893881 - Synthetic construct Homo sapiens clone IMAGE:100008341; FLH165223.01L; RZPDo839H07157D TAO kinase 3 (TAOK3) gene, encodes complete protein.
AF263311 - Homo sapiens STE20-like kinase mRNA, partial cds.
JD553023 - Sequence 534047 from Patent EP1572962.
JD300463 - Sequence 281487 from Patent EP1572962.
JD288154 - Sequence 269178 from Patent EP1572962.
JD499991 - Sequence 481015 from Patent EP1572962.
JD057926 - Sequence 38950 from Patent EP1572962.
JD409043 - Sequence 390067 from Patent EP1572962.
JD442066 - Sequence 423090 from Patent EP1572962.
JD126237 - Sequence 107261 from Patent EP1572962.
AK093623 - Homo sapiens cDNA FLJ36304 fis, clone THYMU2004639, weakly similar to Homo sapiens STE20-like kinase (JIK) mRNA.
BX649175 - Homo sapiens mRNA; cDNA DKFZp686P1598 (from clone DKFZp686P1598).
CU678166 - Synthetic construct Homo sapiens gateway clone IMAGE:100020585 5' read TAOK3 mRNA.
JD410180 - Sequence 391204 from Patent EP1572962.
JD205006 - Sequence 186030 from Patent EP1572962.
JD459117 - Sequence 440141 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: DPK, ENST00000392533.1, ENST00000392533.2, ENST00000392533.3, ENST00000392533.4, ENST00000392533.5, ENST00000392533.6, ENST00000392533.7, JIK, KDS, MAP3K18, NM_016281, Q658N1, Q8IUM4, Q9H2K8, Q9HC79, Q9NZM9, Q9UHG7, TAOK3_HUMAN, uc318veb.1, uc318veb.2
UCSC ID: ENST00000392533.8_7
RefSeq Accession: NM_016281.4
Protein: Q9H2K8 (aka TAOK3_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
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