Human Gene TCERG1 (ENST00000679501.2_4) from GENCODE V47lift37
Description: transcription elongation regulator 1, transcript variant 64 (from RefSeq NR_174450.1)
Gencode Transcript: ENST00000679501.2_4
Gencode Gene: ENSG00000113649.14_11
Transcript (Including UTRs)
Position: hg19 chr5:145,826,896-145,891,524 Size: 64,629 Total Exon Count: 23 Strand: +
Coding Region
Position: hg19 chr5:145,826,913-145,890,205 Size: 63,293 Coding Exon Count: 23
Data last updated at UCSC: 2024-08-22 23:36:26
Sequence and Links to Tools and Databases
Primer design for this transcript
MalaCards Disease Associations
Comparative Toxicogenomics Database (CTD)
Common Gene Haplotype Alleles
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Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
BC006109 - Homo sapiens transcription elongation regulator 1, mRNA (cDNA clone IMAGE:3050987), containing frame-shift errors.BC014151 - Homo sapiens transcription elongation regulator 1, mRNA (cDNA clone IMAGE:3636799).BC062351 - Homo sapiens transcription elongation regulator 1, mRNA (cDNA clone IMAGE:3618446), partial cds.AK126455 - Homo sapiens cDNA FLJ44491 fis, clone UTERU2035328, moderately similar to Homo sapiens putative transcription factor CA150 mRNA.BC111727 - Homo sapiens transcription elongation regulator 1, mRNA (cDNA clone MGC:133200 IMAGE:40028766), complete cds.AB209910 - Homo sapiens mRNA for transcription elongation regulator 1 variant protein.AB464301 - Synthetic construct DNA, clone: pF1KB5637, Homo sapiens TCERG1 gene for transcription elongation regulator 1, without stop codon, in Flexi system.AF017789 - Homo sapiens putative transcription factor CA150 mRNA, complete cds.BC035150 - Homo sapiens cDNA clone IMAGE:5264946, with apparent retained intron.AK304319 - Homo sapiens cDNA FLJ61669 complete cds, highly similar to Transcription elongation regulator 1.AK074511 - Homo sapiens cDNA FLJ90030 fis, clone HEMBA1001297, highly similar to Homo sapiens putative transcription factor CA150 mRNA.BC015864 - Homo sapiens transcription elongation regulator 1, mRNA (cDNA clone IMAGE:4691758), with apparent retained intron.JD360427 - Sequence 341451 from Patent EP1572962.JD282752 - Sequence 263776 from Patent EP1572962.JD475681 - Sequence 456705 from Patent EP1572962.JD184324 - Sequence 165348 from Patent EP1572962.
Other Names for This Gene
Alternate Gene Symbols: A0A7P0T8N8, A0A7P0T8N8_HUMAN, ENST00000679501.1, NR_174450, TCERG1 , uc330fpc.1, uc330fpc.2UCSC ID: ENST00000679501.2_4RefSeq Accession: NM_001382548.1
Gene Model Information
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for a detailed description of the fields of the table above.
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.