Human Gene UNC79 (ENST00000695012.1_4) from GENCODE V47lift37
  Description: unc-79 homolog, NALCN channel complex subunit, transcript variant 4 (from RefSeq NM_001395159.1)
Gencode Transcript: ENST00000695012.1_4
Gencode Gene: ENSG00000133958.14_14
Transcript (Including UTRs)
   Position: hg19 chr14:93,897,285-94,174,222 Size: 276,938 Total Exon Count: 52 Strand: +
Coding Region
   Position: hg19 chr14:93,897,376-94,173,250 Size: 275,875 Coding Exon Count: 52 

Page IndexSequence and LinksPrimersMalaCardsCTDGene Alleles
RNA StructureOther SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr14:93,897,285-94,174,222)mRNA (may differ from genome)Protein (2707 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblExonPrimerGeneCardsHGNC
MalacardsMGIPubMedUniProtKB

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: UNC79
Diseases sorted by gene-association score: esotropia (5)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -20.8091-0.229 Picture PostScript Text
3' UTR -218.00972-0.224 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details Gene Details  
Gene SorterGene Sorter Gene Sorter  
 RGD    
      
      

-  Descriptions from all associated GenBank mRNAs
  AK125327 - Homo sapiens cDNA FLJ43337 fis, clone NT2RI3007158.
AK090721 - Homo sapiens cDNA FLJ33402 fis, clone BRACE2009907.
AX746591 - Sequence 116 from Patent EP1308459.
AB037830 - Homo sapiens mRNA for KIAA1409 protein, partial cds.
BX649040 - Homo sapiens mRNA; cDNA DKFZp686O0698 (from clone DKFZp686O0698).
JD535920 - Sequence 516944 from Patent EP1572962.
JD494515 - Sequence 475539 from Patent EP1572962.
JD450241 - Sequence 431265 from Patent EP1572962.
JD326126 - Sequence 307150 from Patent EP1572962.
JD354973 - Sequence 335997 from Patent EP1572962.
JD096251 - Sequence 77275 from Patent EP1572962.
AK126626 - Homo sapiens cDNA FLJ44664 fis, clone BRACE3004046.
JD358834 - Sequence 339858 from Patent EP1572962.
JD564774 - Sequence 545798 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A8Q3SHI5, A0A8Q3SHI5_HUMAN, NM_001395159, uc330zes.1, uc330zes.2, UNC79
UCSC ID: ENST00000695012.1_4
RefSeq Accession: NM_001395159.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.