Human Gene ZNF605 (ENST00000331711.11_3) from GENCODE V47lift37
  Description: zinc finger protein 605 (from HGNC ZNF605)
Gencode Transcript: ENST00000331711.11_3
Gencode Gene: ENSG00000196458.11_12
Transcript (Including UTRs)
   Position: hg19 chr12:133,503,258-133,532,877 Size: 29,620 Total Exon Count: 4 Strand: -


Page IndexSequence and LinksPrimersCTDRNA-Seq ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr12:133,503,258-133,532,877)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
BioGPSEnsemblExonPrimerHGNCPubMed

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 8.69 RPKM in Brain - Cerebellum
Total median expression: 184.29 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AL832623 - Homo sapiens mRNA; cDNA DKFZp451B1818 (from clone DKFZp451B1818); complete cds.
AK027873 - Homo sapiens cDNA FLJ14967 fis, clone THYRO1000242, moderately similar to ZINC FINGER PROTEIN 84.
AL832191 - Homo sapiens mRNA; cDNA DKFZp686B222 (from clone DKFZp686B222); complete cds.
AK122878 - Homo sapiens cDNA FLJ16520 fis, clone NT2RI3007878, highly similar to Zinc finger protein 605.
BC062737 - Homo sapiens cDNA clone IMAGE:30330029, partial cds.
BC020877 - Homo sapiens zinc finger protein 605, mRNA (cDNA clone IMAGE:4612147), partial cds.
JD440677 - Sequence 421701 from Patent EP1572962.
JD319050 - Sequence 300074 from Patent EP1572962.
JD491363 - Sequence 472387 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: AK027873, ENST00000331711.1, ENST00000331711.10, ENST00000331711.2, ENST00000331711.3, ENST00000331711.4, ENST00000331711.5, ENST00000331711.6, ENST00000331711.7, ENST00000331711.8, ENST00000331711.9, uc317tgu.1
UCSC ID: ENST00000331711.11_3
RefSeq Accession: NM_001164715.2

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.