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UCSC Genome Browser Gene Interaction Graph
Gene interactions and pathways from curated databases and text-mining
HDAC1: top 25 interacting genes (chr1:32757683-32799227)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only HDAC1-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-HDAC1 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with HDAC1, not among the Top 25
Other genes interacting with HDAC1. Mouse-over to show number of abstracts or databases. Sorted by article count (sort alphabetically).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

CASP9 CASP7 HLA-DRB1 IL8 CASP8 IL2 IFNG
SIN3A HDAC3 PTGS2 HDAC4 SFN WNT16 WNT4
E2F1 SP1 IL1A WNT11 AKT2 AKT3 WNT3
KRT27 AKT1 WNT2 WNT1 WNT6 ESR1 SLAMF1
JUN TGFB1 RUNX1 CDKN2A TCF4 TCF24 HDAC7
TCF12 TCF15 PPARG TCF3 BCL2 TCF23 TCF25
TCF7 TCF19 GTF2B TCF20 TCF21 ESR2 CEBPA
CDK2 HDAC10 CDK14 STAT1 SIRT1 CDK10 CDK8
SAP30 CDK20 ARF1 PRKAR2A PRKAR2B CDK15 HDAC6
VEGFA HLA-DRA CDK4 NOTCH3 CDK16 CDK19 CXCR4
STAT3 CDK6 CCND1 CDK7 CDK3 PRKACB TNF
CDK5 PRKACG SUMO1 HDAC5 NOTCH4 CDK12 PRKAR1B
MMP9 CDK18 KLF4 RUNX2 CDK13 DNMT1 PRKAR1A
CDKN2B NOTCH2 LBH CDK9 CDK1 CDK17 ARF5
PDCD4 HIF1A CDH19 CA2 CDH17 CDH7 MMP13
IGF2 CDH26 YY1 NOS3 MAPK10 RB1 PDCD11
PDCD1 FAS MAPK6 CDH6 PDCD2 CDH2 MMP28
PDCD10 SPP1 HDAC8 IGF1 PDCD5 HSP90AA1 CDH22
MYC SOD2 RECK CDH5 TGFB3 KDM1A ARID4B
NR4A1 CDH24 PDCD7 CDH18 IL1B HIPK2 PTBP1
CDH12 MAPK3 MAPK1 SAP130 BRCA1 MAPK8 CDH10
CDH11 CREB3 PLAU MAPK9 MAPK11 CDH20 CDH23
PIK3CA CREB1 MAPK13 CDH4 MMP3 SUMO3 MMP14
SRC PI3 CD8A FXN SUMO2 ARF6 MAPK12
BMP1 PDCD6 CDC20 MAPK15 TNFSF10 PIK3R1 CDH9
BMP4 HDAC9 CDH16 ARF3 CDH3 CDH13 SUDS3
APCS RCOR1 CDH8 TGFB2 MAPK14 AR MAPK4
ARF4 BMP2 IL10 IL4 PCNA SUMO4 SLAMF6
NAB2 MDM2 CDH15 HDAC11 SETD2 CREB5 MEFV
BMF MAPK7 BMP3 USO1 IL12B POLR2L INS
IKBKB CTBP1 TXN CDKN2D MBD2 MMP21 BCL3
SMAD3 FGF2 BMI1 NEUROD6 GP9 UCN IL12A
SOD1 COA4 TNFRSF10B SOD3 HSPA5 MICA PTMS
POLR2C CEBPZ SLAMF9 GP2 SLAMF8 CCND3 CEBPD
CD8B SLAMF7 BCL6 SIRT7 ICAM1 COA5 POLR2I
PTBP2 MMP17 IL5 RHOB GP6 IL9 GTF2F1
POLR2J FGFR3 MMP15 SUZ12 MMP1 HMGB1 SDS
EGF ZMYM2 RELN CSF2 MMP19 ID1 POLR2A
MMP11 BMP10 FOSL1 IFNB1 POLR2H MMP10 OPN1LW
FGF4 HNRNPF XRCC6 NGF H2AFX RPAP1 SLC2A4
KAT2B IGFBP3 BMP15 NEUROD4 MMP26 MCAT POLR2D
JARID2 RREB1 SLC22A3 SERPINB5 OLR1 MMP27 IL18
BMP6 NAB1 TMED7 KIT POLR2F MMP25 PRL
KLF8 MYH14 NEUROD2 POLR2E MMP24 KRT36 COA6
CHUK ZNF217 ADAMTS1 E2F4 BMP7 MMP12 ALOX15
EP300 TERT TGFBR2 ABCB1 IL13 CTNNB1 DYNLL1
VIM MMP16 CLU GP5 ABCC1 FOS RARB
CTDP1 PDLIM7 REST ADAMTS5 BMP5 RBPJ MCOLN1
BAX SOCS3 TAF1 NR5A1 POLR2K NEUROD1 SIRT4
WNT5A MMP7 SIRT5 MMP20 MMP2 GSK3B GTF2F2
COA3 POLR2B NOS2 POLR2G PTEN KDR ZEB1
MT3 RNF19A COA1 SIRT3 CD34 GAL ERBB2
CDYL GATA1 GGT2 CCL2 CREBBP TLR2 HNRNPH1
CD40LG MMP8 GPI RCOR3 SIRT6 SIRT2 VPS28
C7orf50 STAG2 PSMB3 AKAP8L LMNA PLK4 FEN1
UBE2M PGAM5 GDI2 KDM4A TUBG1 ZFPM1 KIF4A
DNTTIP1 GTPBP4 SMC4 CCT8 HMGB2 DIMT1 TNRC18
IMPDH2 SMAD4 HIST1H3F MRPS23 BMS1 UBTF VAPA
SUV39H1 ELK1 DDX18 ZNF687 GATA2 NKX3-2 DCT
HEXIM1 ACTR3 RAB11A RPN1 DEC1 HIST1H2AG TRAF6
SEPT2 RPN2 RCC1 DDX6 NDUFA9 KDM4C BRCC3
RAB11B RPL32 FERMT3 PHB NACA HESX1 TSC22D3
CAPZA1 EXOSC6 MAML1 RNH1 CEPT1 TFPI KDM5B
PGK1 TUBA1C KPNB1 MYO5C LDHB NR2E3 PBX1
POU2F1 SPTBN1 MEF2B GNL3 MYBBP1A IRAK1 SMURF1
ETFA PFDN6 RPS11 NCBP1 MAP4 PKM SEC23B
HP1BP3 LCP1 SRRM2 LMNB1 NUP210 PPT1 CUX2
SAR1A TUBGCP2 PDAP1 HIST1H3G CHD2 PELP1 SMAD1
RPL29 MT-CO2 TGIF1 CAP1 PDHB HNRNPU PRDM5
SQRDL E4F1 AIRE KRT5 SNAI1 SMAD5 PDLIM5
CLIC5 MRTO4 KPNA2 PRPF6 SSBP2 BAZ2A RABEP2
PSMD3 CBX3 EEF1A2 VHL MBD1 KIDINS220 LGALS1
NAA15 PTK2 KPNA4 ACOT13 SRSF1 CPNE1 MRPS28
RPS25 TMEM54 HELLS GANAB NUP205 PLK1 DDX3X
PSMD11 ATAD3A MCM3 MAPRE1 ADNP CAPZB NUP54
EIF4H NOP2 HNRNPR FOXH1 TBL1Y ELMSAN1 HIST1H3H
ATP6V1B2 XPOT MDH2 TUBA4A PSIP1 USP15 GLRX3
SMC2 ANP32B HIST2H3A PSMG1 NDUFA5 LMO4 ARID5B
SMEK1 RSL1D1 MED4 ARL1 BAG2 EEF1B2 NKX3-1
STIP1 STXBP3 ZNF121 IGF2BP3 DHX15 TRIM33 NECAP2
ZMYM3 AP2A2 SKIL ALDH18A1 TSR1 EXOC6 MS4A2
U2AF1 GABPA SOX6 SNRPB IKBKAP HIST1H2BD MAFK
RPL31 PHF14 FAU P4HA1 PRKG1 CDC5L GSTO1
ZNF521 MYL6 PRPS2 SMC1A AIMP2 NR2C1 MTA3
PLAGL1 RCHY1 KANK2 ILK IPO4 TFAM RALA
RPL5 HNRNPH2 SSR4 IPO9 IFRD1 ITGB1 FLNB
NMI REPIN1 DDX47 XPO1 CPSF2 EID2 FOXG1
SLIT2 PFDN5 YES1 SRSF9 TMPO PRMT1 TRIM24
MOGS RAP2B SAP30L CLTB CS SNRNP200 MRPS34
TRIM28 NR3C1 RPA2 TXNDC5 HSD11B2 CITED1 CDK5R1
C14orf166 RPL7 PSMD2 RPL15 MMS19 PRDM4 HCFC1
NHP2 LDB1 BUB1B FGFR1OP MCM7 RPS15 NAT10
RCC2 RRP1B RPL34 TWIST1 SPI1 BHLHE41 SF3B1
DDB2 HIST1H1A RAE1 ACACA IPO7 NUP153 TLE3
FLNA HSPG2 DHX30 HIST3H2BB SFPQ SQSTM1 IGF2R
HSPA8 ERCC3 RPL19 TRIM27 TARS TRMT1L BMX
RAP1A C7orf26 EFCAB6 PAFAH1B2 STRN3 IGF2BP1 AATF
SS18 RANGAP1 PRPF8 TLE4 LYL1 EIF3A PPP6R3
BZW2 DNAJA2 QKI HNRNPA2B1 PPA1 ANXA5 HSPH1
RPP30 IDI1 XRN1 H3F3A NKX2-5 ZNFX1 ATP1A1
HIST1H3B UBR2 ZNF76 PSMC4 SMARCD3 SEPT9 ST13
PRDX3 UBE2N HIST1H1E WDR77 KCTD11 BAZ1A ALDH1B1
SRI PAAF1 HIC1 EIF2S1 GTF3C4 ZC3HAV1 MDN1
KDM5C IQGAP3 EIF5B RERE SSBP1 HSPA1A ZNF148
NEK9 YWHAQ HBP1 PSMC3 NDUFV2 RPL23A HADHB
PAICS KPNA6 POLRMT PTMA UBE3A C11orf30 SF3A3
HIST1H3E HADHA FARSB SYK GCN1L1 RCOR2 RPL28
BANP MBD3L1 MAX ANXA1 RAN HIST1H2BK C8orf33
HEY2 ESYT1 MAGEA1 CCDC6 WIZ MCFD2 CCAR2
NDUFS1 PAX3 PFKP ESYT2 NR2E1 SAP30BP PSMA2
RUVBL1 RAF1 H2AFV ACADM CCT4 RSU1 TBL1X
VPS26A APPL1 SSBP3 NFYC FAM60A SSRP1 CDK2AP2
SOX5 PSMD13 AHNAK SNW1 KRT2 MBD3L2 STAG1
NAPG CPSF7 NOP58 LDHA PSMA4 TRAP1 SLC25A5
EMD BACH1 EIF5 IKZF2 ACLY EIF4ENIF1 YWHAE
YWHAG ZNF609 GLI1 KIAA0368 RAD9A RAC1 PDIA6
ZYX TPD52L1 TAF1B MACF1 HSPD1 NUP214 PSMA6
HIST1H3D NAPA VCL CACYBP RPL24 MSH3 MYT1
RAB18 SRSF7 ESCO1 MORF4L1 SMAP2 LARP7 RALY
XPO5 GFI1 NUP133 SETD8 BMP2K PAPOLA MAGEA6
ZNF395 RPS26 BHLHE40 KRT1 REL CCT5 PPID
SAMSN1 ING1 EIF3E ADH5 SATB2 ACOT8 HIST1H2BL
HIST2H2AA4 PFDN2 CPSF6 HINFP ADD1 DACH1 OLA1
FLOT2 AKAP8 IPO13 EID3 INTS10 VPRBP SEC24C
ATF2 MCM2 BUB1 IKZF3 NUP62 HIST1H2AA RICTOR
NR1D2 BAG6 EEF1G HIST2H2AA3 FBXW7 POLD1 GRWD1
PPP2R5E PRDX1 ASS1 TUBB6 DDX50 SF3B6 PSMC1
SLC25A3 CLTC ZNF281 RAB35 RXRA SMARCA5 SMARCD1
SIPA1 MRPL13 VWA9 FBL TUBA1A BANF2 EIF2S3
BCL6B FBXW8 PHF12 EBNA1BP2 GTPBP1 TADA2A PWP2
PELO DDX17 EIF3I SKP1 CHD1 EEF1A1P5 SRSF3
ERLIN2 WDR36 RAB5C FKBP3 KPNA3 SSB MYL12B
ACTA1 PRKDC ATP2A2 GSE1 UHRF1 UBE2L3 HMGA1
PRPF4 ELAVL1 STAT5A SND1 MYOD1 BCL11A YTHDF2
GSG2 COPE DZIP3 COPB1 NFYA PSMB5 TFDP1
EIF4A1 GATAD1 APOBEC3C H2BFS KLF1 COPG2 EFTUD2
VASP STOM PLOD3 MIER1 DNAJA3 GCDH RPS15A
PTPN14 NF1 PRRG4 SUPT16H MRPS6 TAF12 LMO7
NOP56 HSPB1 PSMG2 MIER3 YWHAH PADI4 TTC9C
ITGA5 LONP1 SALL1 KIF2A ALYREF HIST1H3C RFC3
STRN SLC25A13 SATB1 IPO5 FLOT1 BRIX1 SPEN
MCM6 SUB1 DGCR8 NUP98 MLLT4 HNRNPDL RPL21
DHX9 RPL14 USP24 UBE3C CSNK2B SNRPD3 NFKBIA
ZBTB16 OGT IQGAP2 RBM39 RPA1 RPL10A PA2G4
RPL12 ATP5A1 MIER2 GALE TFCP2 B2M HIST1H1B
NCL NDUFA8 HTATIP C16orf87 CBFA2T3 HIF1AN SF3A1
PSMA7 AP2M1 SNRPE THAP11 HIST1H3J PI4KA TOP2A
NUP155 RXRB TRIM21 TBL3 PPP2R1A STAU1 STAT2
MAML2 CBX8 LASP1 CHD5 SSR1 RARG SYNCRIP
G6PD KARS FANCD2 TK1 SNRPD1 MYO9A SUFU
SETDB1 VBP1 ESCO2 TTC27 CABIN1 ARPC3 PCBP1
SMAD2 GMPS RAB10 BCOR COPG1 EPS15 IGHE
SMCHD1 ZBTB17 TUBB4B NR0B2 MBD4 IDH3G QARS
ZGPAT ATF3 TOP2B KDM5A CNOT1 DDIT3 TAF6L
TLN1 HLX MKX YWHAZ TUFM CKAP5 WISP2
TLE6 FDFT1 ERCC6 NFKB2 POLR1C PTGES2 RFC4
NDUFS3 SRPK1 PSMA5 TKT RPL27A DDX21 RELB
ETHE1 SCRIB PFKL KRT31 IRS4 HSPA6 CBX5
OVOL1 H1FX MPP1 YBX1 HUWE1 IKZF1 XRCC5
ZNF592 HNRNPK SRSF2 PSMC6 TP73 GTF3C2 TRRAP
CFL1 BCL11B SKI SMO PPP1CA CIR1 POLE
EIF3F DNAJA1 RPS23 SLC25A12 HNRNPA3 DROSHA SRSF5
EXOSC3 PSMD4 BROX CAMK2B SEC22B GMNN PRPF19
RPL17 IDH3A MEF2D ATP5J2 GTF3C3 DPM1 RPL35
MRPS22 CSE1L BANF1 MSH2 NR2C2 NUDT21 HSPA4
ARHGAP35 UHRF2 USP39 RPL35A SPTAN1 DYNC1H1 C3orf33
RFX1 PRKCB LRPPRC CLIC2 CHTF18 NRIP1 ABCB7
CORO1B ZNF827 HIST1H1C PSMB1 SPTLC1 TTF1 SEC61B
VPS35 JDP2 KAT5 PPARBP ATR TLE2 EIF3B
DPY30 IDH3B RPS24 CBX1 NDUFS2 TFDP2 HIGD1A
AP2A1 APEX1 HIST1H3I SMC3 HSP90AB1 ASUN GSTK1
SUCLG1 TAB2 SNRPA CELF2 PPP6C SNAI3 POLDIP3
RPS16 SEC61A1 RFC2 CCT6A OAT RAB7A CNN2
RUNX1T1 SUPT5H ARHGEF2 LSM12 RPS7 SYMPK ZMYND8
CYR61 MAD1L1 NHP2L1 IQGAP1 RPS10 PPP1CC KPNA1
CORO1C RFC1 AARS MORF4L2 CCT3 INSM1 TGIF2
ACTBL2 MEN1 RUVBL2 TOP1 PPP2R1B RPL36 RBM12
YWHAB APBB1 ZW10 NARS GNAI3 TFRC GLUD1
FUS TCF1 TPR UBE2I SET HIST1H1D GART
BBX SMARCAD1 KRT18 ESD PWWP2A RPL22 MBTPS1
EXOSC10 DAXX DDX5 TCP1 THRB ARL2 STON2
DDX52 PCGF6 PEX14 UBASH3B CCT2 HNRNPD ATP5C1
HNRNPA0 ZBTB7A RPL13A KRT10 PSMB2 PSME4 DEK
RPL4 PSMA3 PPARD BAHD1 EEF2 BUB3 HIST1H4A
NFE4 ARHGEF1 RPL8 EMG1 DACT1 PSMC2 C1QBP
ASH2L HUS1 RBFOX1 MSH6 GTF3C1 HR SNRNP70
HES1 PRDX6 TRERF1 PHGDH BRCA2 POLD3 EPB41
BEND3 TSHZ3 ERG TAL1 GPS2 SF1 SLC25A11
MYO9B TLE1 CSNK2A2 HIST1H3A HIST1H2BJ LRRC59 COMT
SSX2 EIF3K RAP1B CDK2AP1 RFC5 PITX2 MARS
RPLP2 PARK7 RXRG ABCF1 RTCB DIAPH1 LRBA
GRIP1 EID2B DNAJB1 AKR1C1 AP2B1 RNGTT TRMT61A
ILF3 PHB2 TPM3 SHOC2 CSNK2A1 ENO1 SENP1
CCND2 ITGA4 TTLL12 PRMT5 GAR1 HIST3H3 MSN
ITGAV ILVBL CAND1 MAPKAP1 ZBTB2 EPN1 GLI2
PSMB4 RPL6 PPP2R2A STX4 CLNS1A SLC3A2 EEF1A1
IRF5 U2SURP NDUFA2 NPM1 PRDM1 ANXA2 DNMT3A
RAD21 PICALM PPP2CA ZMYND11 ACTN4 IGF2BP2 NFIX
DLD GLI3 GTF2I TUBB MYL4 TFAP4 ARRB2
EXOSC2 AASS UBC TBL1XR1 DNMT3B ZNF512B SARS
ARPC4 FN1 IDH2 HOXA11 PUF60 RBPJL ALDOA
ATP5B PRKACA NKX2-2 PSMA1 NR2F2 NONO

Data information
Please see the Gene Interactions Track Manual.