We have a suspicion that you are an automated web bot software, not a real user. To keep our site fast for other users, we have slowed down this page. The slowdown will gradually disappear. If you think this is a mistake, please contact us at genome-www@soe.ucsc.edu. Also note that all data for hgGeneGraph can be obtained through our public MySQL server and all our software source code is available and can be installed locally onto your own computer. If you are unsure how to use these resources, do not hesitate to contact us.
UCSC Genome Browser Gene Interaction Graph
Gene interactions and pathways from curated databases and text-mining
HDAC4: top 25 interacting genes (chr2:239969863-240322714)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only HDAC4-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-HDAC4 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with HDAC4, not among the Top 25
Other genes interacting with HDAC4. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

ABLIM1 ACTA1 AGAP3 AHRR AKT1S1 AMPD2 ANKRA2
ANKRD11 APP ARAF ARHGAP35 ARHGEF2 ARID1A ARNT2
ATF2 ATF3 ATF7 ATRX BAD BAIAP2 BCAR1
BCL11A BCL2 BCOR BCORL1 BRAF BRMS1 BUB1B
C1QBP CACNA1A CACNA1C CAMK2D CAMK4 CAMKK1 CASP1
CASP10 CASP12 CASP14 CASP16 CASP2 CASP3 CASP4
CASP5 CASP6 CASP7 CASP8 CASP9 CBL CBX5
CCDC6 CDC20 CDC25C CDC42EP1 CDH1 CDK1 CDKN2A
CEBPB CEP131 CEP170 CEP170B CEP250 CGN CHD3
CHD4 CIITA CIR1 CLASP1 CLASP2 CRTC1 CRTC2
CRTC3 CSMD1 CSNK1A1 CSNK2A1 CSNK2A1P CSRP3 CTNNB1
CXCR4 CYFIP2 CYLD DCAF7 DDX6 DENND1A DENND4A
DENND4C DMTN DNAH9 DNAJB6 DNAJB8 DOCK11 DROSHA
E2F3 EBF1 EDC3 EIF2AK3 EIF4E2 EIF4ENIF1 ELF1
EPB41L3 EPHB6 ERCC5 ESCO2 ESR1 ESR2 EXO1
FAM53C FAM83B FOXO3 FXN GAPVD1 GATA1 GATAD2A
GCM1 GGT2 GIGYF1 GIGYF2 GNB1 GNG2 GRIP1
GTF2B HDAC11 HDAC6 HDAC7 HDAC8 HDAC9 HELZ2
HGS HIC1 HIST1H4A HLA-DRB1 HNF1A HNF4A HSF4
HSPA5 HSPA8 IDI2 IFNG IFRD1 IKZF1 IKZF2
IKZF3 IKZF4 IL10 IL18 IL2 IL24 IL5
IL6 IL9 ING2 IRF6 IRS2 IRS4 JDP2
KDM2A KDM5B KIAA0355 KIAA0930 KIAA1671 KIAA1804 KIF13B
KIF1B KIF1C KIF23 KIF5B KLC1 KLC2 KLC3
KLC4 KMT2B KSR1 LARP1 LIMA1 LMO7 LPAR2
LPAR4 LSM1 LSR LUZP1 LZTR1 MAP1S MAP2K1
MAP2K2 MAP3K2 MAPK8IP3 MARK1 MARK2 MARK3 MAST2
MAST3 MBD2 MBD3 MECOM MED23 MEF2A MEF2B
MEF2C MEF2D MEGF10 MIF4GD MLLT4 MORC2 MORF4
MORF4L1 MT3 MTA2 MTMR12 MTMR6 MYLIP NACC1
NADK NAV1 NCKAP1 NCKIPSD NCOR1 NCOR2 NELFA
NELFB NF1 NFATC1 NFKB1 NFKB2 NFKBIA NFKBIE
NFYB NKRF NOS3 NPPB NR1H2 NR2C1 NR2C2
NRIP1 NUP155 NUP214 OLA1 OSBPL1A OSBPL3 PAK4
PANX3 PARD3 PARK2 PARP12 PARP8 PCDH9 PDZD11
PFKFB2 PHF12 PHF21A PHLDB2 PI4KB PIK3C2A PKP2
PLAU PLEKHA5 PLEKHA7 POU2F3 PPAP2B PPARD PPARG
PPARGC1A PPFIA1 PPFIBP1 PPM1H PPP2CA PPP2R1A PPP2R2B
PPP2R4 PPP2R5D PRKACB PRKACG PRKAR1A PRKAR1B PRKAR2A
PRKAR2B PRKCI PTGS2 PTH PTPN13 PTPN14 PUM1
R3HDM1 R3HDM2 RAB11FIP1 RAB11FIP2 RABEP1 RAF1 RALGPS2
RANBP2 RAPGEF6 RARA RARB RASAL2 RASSF8 REEP1
REEP4 RELA RERE REST REV3L RFX5 RFXANK
RFXAP RICTOR RTKN RUNX2 RUNX3 RUVBL2 RXRA
SAE1 SAMD4A SAMD4B SAP18 SAP30 SENP7 SF1
SH3PXD2A SH3RF1 SH3RF3 SHKBP1 SHROOM2 SHROOM3 SIK1
SIK2 SIK3 SIPA1L3 SKIV2L2 SLC25A6 SMAD3 SMO
SORBS1 SORBS2 SP1 SP3 SPEN SPP1 SPTLC2
SRC SRGAP2 SS18L1 STAM STK3 SUDS3 SUMO1
SUMO2 SUV39H1 SYK TAF1 TAF6L TAL1 TANC2
TBC1D1 TBC1D22A TBC1D22B TBC1D4 TBC1D5 TBL1Y TERT
TGFB1 TGFB2 TGFB3 TIAM1 TNFRSF14 TNFRSF8 TP53
TP53BP1 TP53BP2 TPD52L1 TRAF3IP3 TRIB3 TRIM32 TRIP11
TSC1 TSC2 TTC28 UHRF1BP1L USP54 USP8 UTP6
VAMP8 VIPAS39 VPS33B WDR35 WNK1 WNK4 WNT16
XPO1 YWHAB YWHAE YWHAG YWHAH YWHAQ YWHAZ
YY1 ZAK ZBTB16 ZBTB7B ZCCHC8 ZFP36L2 ZMYND8
ZNF148 ZNF354A ZNF443

Data information
Please see the Gene Interactions Track Manual.