Gene interactions and pathways from curated databases and text-mining
PHGDH: top 25 interacting genes (chr1:120254556-120286838)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only PHGDH-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
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Less-frequently mentioned interactions with PHGDH, not among the Top 25
Other genes interacting with PHGDH. Mouse-over to show number of abstracts or databases. Sorted by article count (sort alphabetically).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

MAD2L1 ▸ COPS4 ▸ ALG1 ▸ RPA1 ▸ LMAN2 ▸ CYB5R3 ▸ SET ▸
LUZP1 ▸ PPP2R5C ▸ ANKHD1 ▸ UBE2N ▸ NCL ▸ PRDX1 ▸ DLST ▸
PFN1 ▸ SHMT2 ▸ MYBBP1A ▸ MRPL13 ▸ RPL18A ▸ RPLP1 ▸ MATR3 ▸
RUVBL1 ▸ SVIL ▸ VPRBP ▸ CCT5 ▸ MDN1 ▸ FANCI ▸ HSPA6 ▸
BLVRB ▸ ITGA5 ▸ HTRA1 ▸ RPSA ▸ SKP1 ▸ SPECC1 ▸ RAB6A ▸
SAP18 ▸ EEF2K ▸ MPRIP ▸ GSTM1 ▸ ARL2 ▸ RACGAP1 ▸ SYNPO ▸
ATAD3A ▸ RCN2 ▸ DNAJA2 ▸ FKBP8 ▸ PPID ▸ CYB5B ▸ GNB1L ▸
DIMT1 ▸ USP7 ▸ PSMD13 ▸ ILK ▸ FLII ▸ GDI2 ▸ IGF2BP2 ▸
EPS15 ▸ ESYT1 ▸ HIST1H3J ▸ PPP1CB ▸ HIST2H2AA4 ▸ CYCS ▸ CAMK2D ▸
PAFAH1B2 ▸ MYO6 ▸ RPS26 ▸ VPS35 ▸ COPS7A ▸ CHP1 ▸ AK2 ▸
SON ▸ TGM2 ▸ TTC9C ▸ LASP1 ▸ DCAF6 ▸ H2AFV ▸ PPP1CC ▸
MACROD1 ▸ EIF3B ▸ COPS5 ▸ RPLP2 ▸ SACM1L ▸ ARPC4 ▸ HIST1H2BH ▸
RPL32 ▸ SSBP1 ▸ PGK1 ▸ MAP1A ▸ AIMP2 ▸ CCNA2 ▸ BAX ▸
MAPRE1 ▸ ATP5J ▸ GP1BB ▸ RPS25 ▸ GLUD1 ▸ XPO5 ▸ HIST1H3H ▸
SF3B6 ▸ ISG15 ▸ ANXA1 ▸ EIF3K ▸ SSR1 ▸ SERPINH1 ▸ GTF3C3 ▸
POLR1C ▸ RHOB ▸ VPS28 ▸ CHCHD4 ▸ UBE2M ▸ ATP5B ▸ RPS11 ▸
TIMM50 ▸ PNKD ▸ SLC25A12 ▸ COPE ▸ CTSD ▸ LMAN1 ▸ MAPRE2 ▸
PPP2R1B ▸ HDAC1 ▸ ITSN2 ▸ RPS13 ▸ SPTAN1 ▸ SRSF2 ▸ MRPS34 ▸
LMNB1 ▸ SLC25A4 ▸ EPRS ▸ H1FX ▸ HNRNPK ▸ HSPA9 ▸ SEC61B ▸
DDA1 ▸ SLC25A18 ▸ AP2A1 ▸ FASN ▸ FEN1 ▸ IRAK1 ▸ MLF2 ▸
VBP1 ▸ PFDN2 ▸ NOP56 ▸ HNRNPU ▸ SSB ▸ YARS ▸ RAB11A ▸
HADHA ▸ PSMA2 ▸ APRT ▸ TAOK2 ▸ SRP14 ▸ SRI ▸ NDUFS7 ▸
NXPE2 ▸ CBWD6 ▸ PDHB ▸ TUBB ▸ MYO1A ▸ PPP3CA ▸ GSTK1 ▸
RPIA ▸ C14orf166 ▸ RPS20 ▸ TARS ▸ UBE2L3 ▸ FLNA ▸ PGRMC1 ▸
RPL3 ▸ GOLGA7 ▸ NHP2 ▸ RAB10 ▸ PGAM1 ▸ BAG2 ▸ VIM ▸
SPTLC1 ▸ LMO7 ▸ COX17 ▸ DDX3X ▸ NHP2L1 ▸ KRT9 ▸ NIPSNAP1 ▸
HSPBP1 ▸ EIF2S3 ▸ SMCHD1 ▸ THNSL2 ▸ NDUFA8 ▸ PRDX3 ▸ KRT17 ▸
SEC61A1 ▸ SLC26A11 ▸ RPS14 ▸ HIST1H3B ▸ PRPS2 ▸ CHMP2B ▸ CKS1B ▸
PPP2CA ▸ EFTUD2 ▸ EIF4A1 ▸ MYL4 ▸ RPS4X ▸ CKB ▸ FANCD2 ▸
SAFB2 ▸ SRR ▸ VAPA ▸ YWHAQ ▸ ATP5O ▸ CCM2L ▸ DHX30 ▸
CUL4A ▸ POLDIP2 ▸ PSMC6 ▸ RPL12 ▸ RPL14 ▸ RPL19 ▸ UTP14A ▸
TK1 ▸ NEXN ▸ SDF4 ▸ USP39 ▸ SF3A3 ▸ NDUFAF3 ▸ SLC25A13 ▸
YWHAB ▸ FDFT1 ▸ FLOT2 ▸ VDAC3 ▸ ALDOA ▸ DAB2 ▸ VASN ▸
SEPT9 ▸ ANXA2 ▸ MRPS6 ▸ DDX47 ▸ FN1 ▸ TNFRSF1B ▸ RPA2 ▸
SRSF5 ▸ GCN1L1 ▸ HIST1H3F ▸ RNH1 ▸ H2BFS ▸ NDUFA2 ▸ NARS ▸
HSPG2 ▸ TMED2 ▸ UQCRC1 ▸ QARS ▸ MCM4 ▸ ATXN10 ▸ CLPP ▸
PSMD6 ▸ SART3 ▸ RPL27 ▸ RPS8 ▸ SF3B1 ▸ TRAP1 ▸ RSU1 ▸
ATP5C1 ▸ DNAJA4 ▸ EDC4 ▸ RAB5C ▸ WDR1 ▸ CPNE1 ▸ C1QBP ▸
ARHGEF1 ▸ NDUFS3 ▸ RPS23 ▸ PRKDC ▸ PCYOX1 ▸ RPL10A ▸ UFL1 ▸
ZW10 ▸ MTA2 ▸ TFRC ▸ DUT ▸ HADHB ▸ HNRNPA2B1 ▸ TOMM70A ▸
RPL17 ▸ FAU ▸ DNAJC7 ▸ CRBN ▸ TNPO3 ▸ ARCN1 ▸ TUFM ▸
SLC3A2 ▸ GMPS ▸ NUP188 ▸ TARS2 ▸ ATP6V1B2 ▸ GLRX3 ▸ SCAMP3 ▸
UBE2NL ▸ TNPO2 ▸ PDCD6 ▸ SNRNP70 ▸ RPS3 ▸ RPS24 ▸ MRPL43 ▸
PFDN5 ▸ CORO1C ▸ GSTM3 ▸ PHB ▸ COX6C ▸ TUBB6 ▸ IPO7 ▸
RFT1 ▸ CUL3 ▸ TTN ▸ CCDC85C ▸ EIF5B ▸ RAB7A ▸ ARF6 ▸
RPL24 ▸ RAB14 ▸ TFG ▸ ATXN2L ▸ LIMA1 ▸ PCBP1 ▸ HIST1H3G ▸
TUBA4A ▸ MAPK6 ▸ MYO18A ▸ RPN2 ▸ CKAP5 ▸ RPL31 ▸ EPB41 ▸
CLNS1A ▸ XPOT ▸ HSP90B1 ▸ TIA1 ▸ HNRNPDL ▸ SNRPE ▸ FAM162A ▸
MIF ▸ TMPO ▸ EIF3F ▸ RALY ▸ IPO4 ▸ NECAP2 ▸ FERMT3 ▸
DHRS7B ▸ YWHAG ▸ ATP5L ▸ SLC25A3 ▸ LAMP1 ▸ PCBP2 ▸ EPPK1 ▸
RAP1B ▸ SNRPD3 ▸ RPL7 ▸ SLC25A11 ▸ AP2A2 ▸ UTP18 ▸ TM9SF2 ▸
MYH14 ▸ FLNB ▸ RPN1 ▸ TAF15 ▸ PTGES3 ▸ TMEM33 ▸ CLTB ▸
PSMD9 ▸ NAPA ▸ ECT2 ▸ IDI1 ▸ DNAJB1 ▸ GALE ▸ HMGB2 ▸
MT-CO2 ▸ TTLL12 ▸ KIDINS220 ▸ YES1 ▸ MACF1 ▸ TUBB2A ▸ VAMP3 ▸
PGRMC2 ▸ HIST2H2AA3 ▸ RAI14 ▸ CLIC2 ▸ SPTBN1 ▸ SLC37A4 ▸ WDTC1 ▸
PTRH2 ▸ U2AF2 ▸ PRKCB ▸ KRT2 ▸ NAPG ▸ STAT1 ▸ CCDC47 ▸
EPN1 ▸ HNRNPH2 ▸ KPNB1 ▸ S100A8 ▸ NASP ▸ KRT8 ▸ ANP32B ▸
HSP90AB1 ▸ GIGYF1 ▸ SKIV2L2 ▸ SHC1 ▸ HSPA5 ▸ GSTO1 ▸ WDR36 ▸
IPO5 ▸ SARS ▸ PPP1R9B ▸ HNRNPH1 ▸ PSMA5 ▸ MDH2 ▸ TUBB3 ▸
MPP1 ▸ TPR ▸ SMU1 ▸ RPL30 ▸ DAPK3 ▸ GPS1 ▸ XPO1 ▸
YBX1 ▸ NOP58 ▸ PABPC1 ▸ AMBRA1 ▸ OGDH ▸ HBZ ▸ PPA1 ▸
TMEM205 ▸ VASP ▸ HSPA1L ▸ RPL36 ▸ ITGB1 ▸ ERLIN1 ▸ AP2M1 ▸
PSMB1 ▸ SRSF3 ▸ SF3B3 ▸ SAR1A ▸ RPS18 ▸ RPL21 ▸ RRAS2 ▸
HSD17B12 ▸ SCRIB ▸ UBE2C ▸ G6PD ▸ SSR3 ▸ NDUFV2 ▸ TCEB1 ▸
HIST1H3E ▸ ARPC1A ▸ HSPA1A ▸ RANBP9 ▸ PPP6R3 ▸ RPL13 ▸ SRPRB ▸
UQCRC2 ▸ TMOD3 ▸ KIAA0368 ▸ STXBP3 ▸ SLIRP ▸ CSNK2B ▸ RPL35A ▸
CNN2 ▸ LGALS1 ▸ MISP ▸ DHRS7 ▸ NDUFA9 ▸ PUF60 ▸ RBBP4 ▸
STX4 ▸ ARL8A ▸ ESD ▸ CAND1 ▸ MYL9 ▸ PDCD10 ▸ DAD1 ▸
TPM3 ▸ DST ▸ CCT2 ▸ FBXO25 ▸ POLR2C ▸ USP15 ▸ ATP5A1 ▸
HIST1H2AA ▸ TBC1D15 ▸ EIF4A3 ▸ APOE ▸ PSMD3 ▸ PSMD11 ▸ EIF5 ▸
QKI ▸ PDAP1 ▸ RPS15A ▸ COASY ▸ RPS3A ▸ MEPCE ▸ ARF3 ▸
HIST1H3D ▸ MYL12A ▸ DYNC1H1 ▸ CAPRIN1 ▸ KRT7 ▸ PPP1CA ▸ RPL23 ▸
GNAI3 ▸ PGAM5 ▸ PDCD5 ▸ TUBB4A ▸ SMARCA5 ▸ COPS3 ▸ BZW1 ▸
DDX18 ▸ NAP1L1 ▸ PDLIM7 ▸ S100A6 ▸ SEC23B ▸ ICAM1 ▸ KRT10 ▸
PI4KA ▸ CLN5 ▸ COX5A ▸ CLPX ▸ ALYREF ▸ RPL10 ▸ BMP2K ▸
USMG5 ▸ PPP1R12A ▸ TKT ▸ DNAJC11 ▸ ESYT2 ▸ LETM1 ▸ DHCR7 ▸
IRS4 ▸ CLIC5 ▸ TYMS ▸ DCAF4 ▸ DDB1 ▸ TOP2A ▸ HIST1H3A ▸
ILF2 ▸ DYNLL1 ▸ DDX39B ▸ NUP205 ▸ CTSH ▸ PPP2R1A ▸ RPL15 ▸
SV2A ▸ NAA38 ▸ TRPC4AP ▸ ANAPC7 ▸ COPA ▸ CUL2 ▸ GID8 ▸
IMMT ▸ RAB35 ▸ SMC4 ▸ SRSF11 ▸ UBA1 ▸ SNRPA1 ▸ EEF1D ▸
PSMB6 ▸ IGF2R ▸ IGF2BP3 ▸ GFM1 ▸ GNB3 ▸ ATP1A1 ▸ ST13 ▸
ALDH1B1 ▸ APIP ▸ SEPT2 ▸ ASPH ▸ SLC25A6 ▸ CACYBP ▸ PAWR ▸
NACA ▸ EIF4H ▸ SEC24C ▸ HM13 ▸ MCM6 ▸ PCNA ▸ MDC1 ▸
CCAR1 ▸ PSMG2 ▸ SAR1B ▸ YWHAH ▸ LDHA ▸ GTPBP4 ▸ MYL6 ▸
STRAP ▸ PPIA ▸ CAP1 ▸ RPS28 ▸ SNRPB ▸ THRAP3 ▸ VAT1 ▸
FARSB ▸ HEATR1 ▸ AUP1 ▸ PARP1 ▸ MYH9 ▸ BSG ▸ LRRFIP2 ▸
VDAC2 ▸ MAPK13 ▸ CPSF6 ▸ MSN ▸ PDIA6 ▸ FLOT1 ▸ HMGB1 ▸
TIMM23 ▸ CBLB ▸ RPL4 ▸ LYPLA1 ▸ PHF5A ▸ PRPF8 ▸ MYH10 ▸
XRCC5 ▸ HSPB1 ▸ KRT18 ▸ CHD4 ▸ CCNB2 ▸ SUPT5H ▸ TTC1 ▸
TUBA1B ▸ CLTA ▸ FSCN1 ▸ MYO3B ▸ RAP2B ▸ SRP9 ▸ SND1 ▸
MRTO4 ▸ MLLT4 ▸ ESPL1 ▸ RPS16 ▸ SYNCRIP ▸ PSMC5 ▸ STON2 ▸
CFL1 ▸ ERLIN2 ▸ PSMB3 ▸ EEF1G ▸ MARS ▸ PPP2CB ▸ BCAP31 ▸
DDB2 ▸ TCERG1 ▸ DDX5 ▸ MAP3K3 ▸ U2AF1 ▸ KRTCAP2 ▸ COPB1 ▸
ESR1 ▸ SMAP2 ▸ LUC7L2 ▸ NAP1L4 ▸ MAPK1 ▸ CCT4 ▸ MRPS28 ▸
PDIA3 ▸ CRKL ▸ PSMD2 ▸ SUB1 ▸ CCNB1 ▸ SFPQ ▸ TMED10 ▸
RPL13A ▸ HIST1H3C ▸ SIPA1 ▸ TRIM55 ▸ TUBB2B ▸ NDUFA4 ▸ TENC1 ▸
C2orf47 ▸ EMD ▸ PSAT1 ▸ EEF2 ▸ RPS7 ▸ AURKB ▸ CLTC ▸
ATP5J2 ▸ STOM ▸ SEC22B ▸ TECR ▸ KRT5 ▸ TIAF1 ▸ RPL35 ▸
PLS3 ▸ SMARCA4 ▸ GAR1 ▸ HIST1H1C ▸ GSTP1 ▸ TPM2 ▸ GANAB ▸
PRKD1 ▸ CALM1 ▸ ERCC8 ▸ VAV2 ▸ SNRPD2 ▸ TRA2A ▸ HSPD1 ▸
LDHB ▸ LRBA ▸ PSMA7 ▸ PSMD12 ▸ RPS10 ▸ CFL2 ▸ EMG1 ▸
NPM1 ▸ ATP5D ▸ CUL4B ▸ ITPR3 ▸ LYPLAL1 ▸ STK4 ▸ RPL27A ▸
KARS ▸ ARPC3 ▸ HDAC5 ▸ CHCHD3 ▸ NDUFA13 ▸ UBR4 ▸ VCAM1 ▸
CELF2 ▸ PHB2 ▸ AP2B1 ▸ TPM1 ▸ LRRC59 ▸ CBR1 ▸ SRSF1 ▸
RPL23A ▸ PBLD ▸ PFKP ▸ PKMYT1 ▸ PAGE1 ▸ EEF1A1 ▸ SYNGR1 ▸
YTHDF2 ▸ C11orf83 ▸ N6AMT1 ▸ GMFB ▸ ALDH18A1 ▸ PTPLAD1 ▸ KANK2 ▸
SCIN ▸ PAICS ▸ C3 ▸ DCAF10 ▸ RPS15 ▸ TFAM ▸ PFKL ▸
PICALM ▸ IARS ▸ GTF3C5 ▸ ILF3 ▸ AHNAK ▸ ANXA6 ▸ RTCB ▸
STAT3 ▸ RAD23A ▸ DIAPH1 ▸ CPT2 ▸ LCP1 ▸ RBBP7 ▸ VAV3 ▸
RAB1B ▸ DNAJA1 ▸ RAN ▸ M6PR ▸ RPS6 ▸ MYO1C ▸ RANBP1 ▸
ATP2A2 ▸ GRB2 ▸ SLC25A10 ▸ YWHAE ▸ CANX ▸ DHX16 ▸ RPL6 ▸
MGST3 ▸ UACA ▸ CD59 ▸ DLD ▸ HIST1H1B ▸ DCAF11 ▸ PSMA4 ▸
MYL12B ▸ NONO ▸ DHX9 ▸ CBX3 ▸ DCAF15 ▸ HIP1 ▸ SOS1 ▸
PTPN11 ▸ RPS27A ▸ HNRNPM ▸ SSR4 ▸ PCMT1 ▸ NDUFAF4 ▸ PPT1 ▸
TIMM10 ▸ MYO1B ▸ BROX ▸ GSN ▸ MARCKS ▸ EIF2S1 ▸ SURF4 ▸
COMT ▸ POLR2H ▸ SLC25A5 ▸ TCEB2 ▸ APOBEC3C ▸ TRAF3IP1 ▸ PRMT5 ▸
CCDC124 ▸ DCAF12 ▸ GALK1 ▸ PELP1 ▸ HNRNPA1 ▸ NME2 ▸ CNOT1 ▸
NAT10 ▸ RCC2 ▸ CSNK2A1 ▸ TMX1 ▸ ATP5F1 ▸ PKM ▸ PPP6C ▸
CDIPT ▸ FLNC ▸ CORO1B ▸ CAPZA1 ▸ CAPZB ▸ DDX6 ▸ HSPA8 ▸
SNRPA ▸ RAB11B ▸ OSBPL8 ▸ CCT7 ▸ DTL ▸ PFDN6 ▸ VPS26A ▸
CDKN1B ▸ EGFR ▸ LMNA ▸ DPM1 ▸ STIP1 ▸ APP ▸ SLC25A1 ▸
MLLT11 ▸ COPS6 ▸ EPS15L1 ▸ VTN ▸ BAG6 ▸ TXN ▸ VCL ▸
PMVK ▸ ENO1 ▸ RIC8A ▸ PIAS4 ▸ PDLIM5 ▸ DNMT1 ▸ TAGLN2 ▸
BZW2 ▸ RAC1 ▸ YWHAZ ▸ HIST1H4A ▸ MAP4 ▸ SSRP1 ▸ RUVBL2 ▸
ZYX ▸ MMS19 ▸ GTF3C1 ▸ STUB1 ▸ ZMPSTE24 ▸ FAM186B ▸ RAB21 ▸
SLC1A5 ▸ GAPDH ▸ PSMB5 ▸ RPL28 ▸ KRT1 ▸ FBLN1 ▸ TMEM109 ▸
TLN1 ▸ AKR1C1 ▸ CCT8 ▸ VAMP8 ▸ PRMT1 ▸ PRPF4 ▸ CUL5 ▸
RPL26 ▸ SUMO4 ▸ CDK2 ▸ CSE1L ▸ NUP155 ▸ DCAF16 ▸ ELAVL1 ▸
MAP7D1 ▸ SDHA ▸ BCLAF1 ▸ COX4I1 ▸ HNRNPD ▸ PPIH ▸ EEF1E1 ▸
IQGAP1 ▸ NCBP1 ▸ RBM12 ▸ STAT2 ▸ LYPLA2 ▸ NOMO3 ▸ NME2P1 ▸
ARPC5 ▸ TRIM28 ▸ RPL29 ▸ RPL8 ▸ SERBP1 ▸ ASNS ▸ HSPE1 ▸
ATP5H ▸ MCM3 ▸ RPL22 ▸ SPECC1L ▸ DDX1 ▸ DBN1 ▸ CPSF7 ▸
KPNA2 ▸ DCAF8 ▸ SUMO1 ▸ AP2S1 ▸ ITGAV ▸ PLEC ▸ PRPF19 ▸
TBCD ▸ NDUFA5 ▸ IMPDH2 ▸ MRPS23 ▸ LSM12 ▸ PSMB2 ▸ CCNO ▸
CYC1 ▸ SFXN1 ▸ STOML2 ▸ G3BP1 ▸ OLA1 ▸ APOA1BP ▸ RPS5 ▸
TOMM22 ▸ SNAP23 ▸ CCT6A ▸ GART ▸ PSMA3 ▸ SKP2 ▸ SC5D ▸
DHX15 ▸ PFDN1 ▸ SF1 ▸ SRSF10 ▸ PES1 ▸ UBD ▸ CLN3 ▸
PA2G4 ▸ CCT3 ▸ HMGA1 ▸ UBC ▸ RCC1 ▸ CLPB ▸ KRT31 ▸
XRCC6 ▸ NUDC ▸ GRWD1 ▸ IK ▸ FUS ▸ AIFM1 ▸ UBB ▸
CEPT1 ▸ HSP90AA1 ▸ TUBB4B ▸ RPS9 ▸ RPL5 ▸ CTTN ▸ SNRPF ▸
NCSTN ▸ EEF1B2 ▸ MCM2 ▸ RAE1 ▸ RPS27 ▸ COPS7B ▸ PTBP1 ▸
ATP1B3 ▸ RCN1 ▸ S100A7 ▸ UGDH ▸ HIST1H3I ▸ VDAC1 ▸ NUP210 ▸
HIST1H1E ▸ NAA15 ▸ EIF3C ▸ SCO2 ▸ SCAP ▸ RPL18 ▸ SLC16A1 ▸
CKS2 ▸ ITGA4 ▸ SRSF9 ▸ LRPPRC ▸ SYNJ2BP ▸ CHCHD6 ▸ PSMA6 ▸
HIST1H2BJ ▸ HNRNPF ▸ PSMG1 ▸ EPHX1 ▸ ARPC2 ▸ GDA ▸ PRDX6 ▸
Data information
Please see the Gene Interactions Track Manual.