Gene interactions and pathways from curated databases and text-mining
PHGDH: top 25 interacting genes (chr1:120254556-120286838)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only PHGDH-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
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Less-frequently mentioned interactions with PHGDH, not among the Top 25
Other genes interacting with PHGDH. Mouse-over to show number of abstracts or databases. Sorted by article count (sort alphabetically).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

RALY ▸ HMGB1 ▸ BAG2 ▸ MACROD1 ▸ H2BFS ▸ UBD ▸ ITGA5 ▸
CCDC85C ▸ ANKHD1 ▸ MYH14 ▸ ATP5O ▸ YWHAE ▸ EPS15L1 ▸ SAR1B ▸
ATP5J2 ▸ MAP4 ▸ PGAM5 ▸ PRKD1 ▸ RPL10 ▸ VPS26A ▸ LMNA ▸
GNAI3 ▸ LMO7 ▸ PI4KA ▸ PKM ▸ DDX5 ▸ IPO4 ▸ USP15 ▸
CORO1C ▸ IARS ▸ NHP2L1 ▸ SPTBN1 ▸ ZMPSTE24 ▸ RPS10 ▸ FSCN1 ▸
LMAN2 ▸ MLLT4 ▸ AKR1C1 ▸ EDC4 ▸ TMED2 ▸ XPOT ▸ MARS ▸
MRPS34 ▸ PKMYT1 ▸ RAB7A ▸ ZW10 ▸ ARCN1 ▸ EFTUD2 ▸ EIF4A1 ▸
PHF5A ▸ EGFR ▸ RPS7 ▸ FLII ▸ PFDN6 ▸ PSMD6 ▸ HBZ ▸
FAM186B ▸ SPECC1L ▸ EPB41 ▸ FN1 ▸ FLNA ▸ TMPO ▸ IQGAP1 ▸
GPS1 ▸ SRSF2 ▸ EIF5 ▸ HSPB1 ▸ XPO1 ▸ APOE ▸ GALE ▸
TMEM33 ▸ TAGLN2 ▸ ISG15 ▸ FAM162A ▸ EPPK1 ▸ SDF4 ▸ NDUFS3 ▸
CCNB1 ▸ ESYT1 ▸ PPIA ▸ APOA1BP ▸ ARF3 ▸ KRTCAP2 ▸ SRR ▸
AP2B1 ▸ RIC8A ▸ RAB6A ▸ PAWR ▸ LDHB ▸ SFPQ ▸ CCT4 ▸
DDA1 ▸ PPP1R9B ▸ KRT18 ▸ SRSF1 ▸ TUBB2B ▸ PFDN5 ▸ TARS2 ▸
PTPLAD1 ▸ NUP205 ▸ HIST2H2AA4 ▸ PSMB2 ▸ DCAF6 ▸ SEPT2 ▸ PGK1 ▸
RPS4X ▸ PSMG2 ▸ RCN1 ▸ SF3B6 ▸ SVIL ▸ MRPS6 ▸ KRT8 ▸
ILF2 ▸ CHCHD3 ▸ MCM4 ▸ EPRS ▸ FLNC ▸ VAPA ▸ PPP1CC ▸
EMG1 ▸ NAP1L4 ▸ VBP1 ▸ DST ▸ SMARCA4 ▸ SRSF3 ▸ PFDN1 ▸
PSMC6 ▸ SLC37A4 ▸ ATP5F1 ▸ BAG6 ▸ CEPT1 ▸ IGF2BP3 ▸ RPL22 ▸
GSN ▸ HNRNPK ▸ GANAB ▸ TBCD ▸ LRRFIP2 ▸ HSPA9 ▸ PGRMC1 ▸
RPS27 ▸ FLOT1 ▸ SMC4 ▸ PSMA2 ▸ RACGAP1 ▸ HIST1H1C ▸ STON2 ▸
BZW2 ▸ COPA ▸ NARS ▸ HNRNPH2 ▸ CYCS ▸ MRTO4 ▸ AUP1 ▸
NUP155 ▸ PCBP1 ▸ PDCD5 ▸ SEPT9 ▸ SSBP1 ▸ RPL13 ▸ WDR36 ▸
DNAJB1 ▸ PSMA6 ▸ RSU1 ▸ SACM1L ▸ CAMK2D ▸ RAB10 ▸ AHNAK ▸
DHX16 ▸ RPS15A ▸ HNRNPM ▸ CYB5B ▸ KRT31 ▸ CLPX ▸ HSPA5 ▸
PTGES3 ▸ RPA2 ▸ CCT2 ▸ TTN ▸ SNRPA1 ▸ YARS ▸ HMGB2 ▸
RAB35 ▸ NDUFV2 ▸ SUB1 ▸ VPS35 ▸ VPS28 ▸ GSTK1 ▸ LDHA ▸
TIA1 ▸ VCAM1 ▸ SRI ▸ LRRC59 ▸ CKAP5 ▸ CHD4 ▸ TRIM28 ▸
DAD1 ▸ NUDC ▸ POLR2H ▸ PRPS2 ▸ SEC22B ▸ UGDH ▸ COX6C ▸
GSTM3 ▸ RAP2B ▸ APRT ▸ CDIPT ▸ VASP ▸ COPB1 ▸ PGRMC2 ▸
ERLIN1 ▸ LCP1 ▸ TKT ▸ CALM1 ▸ PFDN2 ▸ SRP14 ▸ HNRNPA1 ▸
TNPO2 ▸ CLPP ▸ COPS6 ▸ PRMT5 ▸ SCAP ▸ CSNK2B ▸ SF1 ▸
C2orf47 ▸ HTRA1 ▸ RPS14 ▸ GP1BB ▸ SKP1 ▸ NEXN ▸ ARPC5 ▸
RPLP2 ▸ TOP2A ▸ MAP3K3 ▸ ATP1A1 ▸ WDR1 ▸ FUS ▸ CCM2L ▸
AP2M1 ▸ PDLIM7 ▸ RRAS2 ▸ RPS11 ▸ BROX ▸ DYNLL1 ▸ SLC25A4 ▸
LYPLA2 ▸ USP7 ▸ NOP58 ▸ UBR4 ▸ PPP1CA ▸ FEN1 ▸ PRPF8 ▸
PAICS ▸ ITSN2 ▸ TIMM10 ▸ RAP1B ▸ SNRPD3 ▸ RPS9 ▸ USP39 ▸
UBE2L3 ▸ PFN1 ▸ ALDH1B1 ▸ CCNO ▸ CLTA ▸ DNAJC7 ▸ HSP90B1 ▸
RPL23A ▸ MYL4 ▸ PTBP1 ▸ PHB2 ▸ UBA1 ▸ NASP ▸ DHRS7 ▸
RPL19 ▸ SMAP2 ▸ FERMT3 ▸ UBB ▸ CCAR1 ▸ CBR1 ▸ CLIC5 ▸
EIF3C ▸ YTHDF2 ▸ SF3B1 ▸ SLIRP ▸ PICALM ▸ TPR ▸ NDUFA2 ▸
TLN1 ▸ SLC25A13 ▸ RPSA ▸ COPS7B ▸ IMMT ▸ TYMS ▸ SERPINH1 ▸
UQCRC1 ▸ CDKN1B ▸ VIM ▸ VAMP3 ▸ VAT1 ▸ DUT ▸ PDIA6 ▸
HIST1H2BH ▸ SEC61B ▸ DLD ▸ CCT6A ▸ EPS15 ▸ IRAK1 ▸ NAA38 ▸
NOP56 ▸ ZYX ▸ ALG1 ▸ SSRP1 ▸ SND1 ▸ TFRC ▸ CLNS1A ▸
GNB1L ▸ MAP1A ▸ KPNA2 ▸ GFM1 ▸ PRMT1 ▸ SEC23B ▸ MGST3 ▸
YES1 ▸ CCNB2 ▸ SHC1 ▸ VPRBP ▸ RPS25 ▸ PSMC5 ▸ ATAD3A ▸
DHRS7B ▸ SLC25A11 ▸ AURKB ▸ MDN1 ▸ RPL30 ▸ SYNPO ▸ ANXA2 ▸
TCEB2 ▸ TTLL12 ▸ LYPLAL1 ▸ BLVRB ▸ MPP1 ▸ SCIN ▸ PCNA ▸
TNFRSF1B ▸ TPM3 ▸ SON ▸ COX5A ▸ IMPDH2 ▸ NONO ▸ NCBP1 ▸
SPTLC1 ▸ CAPZB ▸ FBXO25 ▸ VDAC3 ▸ PPA1 ▸ CTSD ▸ ASNS ▸
NXPE2 ▸ GSTM1 ▸ KRT2 ▸ HSPD1 ▸ LMAN1 ▸ TTC1 ▸ RPL27 ▸
CDK2 ▸ CHMP2B ▸ DDX6 ▸ DLST ▸ RPL17 ▸ HIST1H3H ▸ RPS3A ▸
POLDIP2 ▸ RPL29 ▸ UQCRC2 ▸ SYNGR1 ▸ ATP5L ▸ SUMO4 ▸ ARPC4 ▸
HIST1H3I ▸ NDUFA4 ▸ DCAF12 ▸ NIPSNAP1 ▸ PSAT1 ▸ RPL35 ▸ RPL18A ▸
SC5D ▸ TMEM205 ▸ IPO5 ▸ HMGA1 ▸ UBE2N ▸ ALYREF ▸ XRCC5 ▸
COX17 ▸ APP ▸ GLUD1 ▸ CAND1 ▸ HIST1H1E ▸ DDB2 ▸ HSPA1L ▸
ATP5A1 ▸ DCAF11 ▸ MYH10 ▸ HSPA1A ▸ PDAP1 ▸ RPL6 ▸ STK4 ▸
GAR1 ▸ AMBRA1 ▸ CTSH ▸ SERBP1 ▸ THNSL2 ▸ MLLT11 ▸ SMCHD1 ▸
FKBP8 ▸ NME2P1 ▸ ATP1B3 ▸ G6PD ▸ VCL ▸ HSD17B12 ▸ HNRNPF ▸
CANX ▸ CPNE1 ▸ RPL24 ▸ HIST1H3A ▸ CLTC ▸ TUBB3 ▸ TRAF3IP1 ▸
SSR1 ▸ PHB ▸ BCAP31 ▸ RPS18 ▸ ESPL1 ▸ SNRPE ▸ TMX1 ▸
RPL26 ▸ MYO18A ▸ PELP1 ▸ SLC25A10 ▸ DYNC1H1 ▸ UTP18 ▸ CAP1 ▸
ARPC2 ▸ SF3A3 ▸ MAD2L1 ▸ DCAF8 ▸ HDAC5 ▸ NAP1L1 ▸ SOS1 ▸
TRA2A ▸ NDUFAF4 ▸ M6PR ▸ AK2 ▸ ANP32B ▸ MYO6 ▸ TENC1 ▸
LASP1 ▸ TAOK2 ▸ SUMO1 ▸ RAB11A ▸ MAPK1 ▸ NHP2 ▸ RPIA ▸
TMED10 ▸ COPE ▸ CLN3 ▸ NAT10 ▸ UTP14A ▸ RPS26 ▸ NACA ▸
PBLD ▸ RAB1B ▸ HM13 ▸ PRDX3 ▸ CD59 ▸ PPP2CA ▸ FANCI ▸
THRAP3 ▸ XPO5 ▸ MCM2 ▸ PSMD2 ▸ RUVBL1 ▸ MLF2 ▸ HNRNPD ▸
EEF1D ▸ ERCC8 ▸ IRS4 ▸ SURF4 ▸ TTC9C ▸ LSM12 ▸ NAA15 ▸
RPL7 ▸ STXBP3 ▸ GTF3C5 ▸ ANAPC7 ▸ RCN2 ▸ ATP5B ▸ LAMP1 ▸
RPS24 ▸ PNKD ▸ AP2A1 ▸ PARP1 ▸ HNRNPA2B1 ▸ FLNB ▸ RPN1 ▸
DNAJA2 ▸ AIFM1 ▸ NDUFA13 ▸ SNRPF ▸ MARCKS ▸ CYC1 ▸ HNRNPU ▸
DIMT1 ▸ YWHAH ▸ BCLAF1 ▸ HIST1H2AA ▸ PRDX1 ▸ RAB11B ▸ NME2 ▸
EIF2S1 ▸ PUF60 ▸ PDHB ▸ MRPS23 ▸ POLR2C ▸ APIP ▸ CCT3 ▸
ATP6V1B2 ▸ ATP5J ▸ NDUFA9 ▸ TFAM ▸ EIF3K ▸ SLC25A3 ▸ COASY ▸
EEF2 ▸ STAT2 ▸ ALDOA ▸ HIST1H2BJ ▸ RAB5C ▸ ERLIN2 ▸ PPP2CB ▸
CCT7 ▸ NAPA ▸ RBBP4 ▸ RFT1 ▸ TUBB4B ▸ ITGA4 ▸ PLEC ▸
EPN1 ▸ IPO7 ▸ NDUFAF3 ▸ DTL ▸ STUB1 ▸ HIP1 ▸ DCAF16 ▸
USMG5 ▸ RAE1 ▸ MDH2 ▸ RPS8 ▸ EEF1B2 ▸ PTPN11 ▸ CKS2 ▸
RAC1 ▸ RPLP1 ▸ VTN ▸ EIF4H ▸ RBBP7 ▸ CFL2 ▸ STAT3 ▸
HIST1H1B ▸ DCAF4 ▸ HSPA6 ▸ PSMD9 ▸ RUVBL2 ▸ C3 ▸ MRPL43 ▸
KRT10 ▸ ATXN2L ▸ COPS4 ▸ MAPK13 ▸ RPL23 ▸ RTCB ▸ GTF3C1 ▸
OLA1 ▸ DDX3X ▸ PPP1R12A ▸ SARS ▸ PMVK ▸ TXN ▸ DHX15 ▸
IGF2BP2 ▸ PRKCB ▸ PRDX6 ▸ LMNB1 ▸ KANK2 ▸ RPS15 ▸ CNN2 ▸
CUL4A ▸ EIF3B ▸ RCC1 ▸ ANXA6 ▸ H1FX ▸ HIST2H2AA3 ▸ PPT1 ▸
C11orf83 ▸ DHX9 ▸ VAMP8 ▸ PRPF4 ▸ DDX1 ▸ TOMM70A ▸ PSMD11 ▸
DDX47 ▸ RPS13 ▸ LRPPRC ▸ SNRPD2 ▸ COPS5 ▸ SV2A ▸ WDTC1 ▸
CPSF6 ▸ GIGYF1 ▸ HEATR1 ▸ XRCC6 ▸ MPRIP ▸ RHOB ▸ CAPRIN1 ▸
YBX1 ▸ RAI14 ▸ RPL5 ▸ FBLN1 ▸ MYO3B ▸ ARPC1A ▸ ASPH ▸
PLS3 ▸ RPL18 ▸ TUBB ▸ GSTP1 ▸ MT-CO2 ▸ TUBB2A ▸ SDHA ▸
HADHB ▸ DNMT1 ▸ GID8 ▸ HIST1H3E ▸ TIMM50 ▸ EIF2S3 ▸ TAF15 ▸
ANXA1 ▸ MAPK6 ▸ ESYT2 ▸ GDA ▸ CLIC2 ▸ GMFB ▸ ITGB1 ▸
KRT7 ▸ HSP90AA1 ▸ U2AF1 ▸ ATP5D ▸ HIST1H3J ▸ PRKDC ▸ TCEB1 ▸
SCO2 ▸ EEF1A1 ▸ NAPG ▸ KRT5 ▸ S100A6 ▸ TRAP1 ▸ SPECC1 ▸
DBN1 ▸ SAFB2 ▸ CCDC124 ▸ YWHAZ ▸ SRPRB ▸ SLC26A11 ▸ CBWD6 ▸
CRKL ▸ VAV2 ▸ PSMG1 ▸ KRT9 ▸ UACA ▸ PCBP2 ▸ PDLIM5 ▸
SIPA1 ▸ HSP90AB1 ▸ TMEM109 ▸ SNAP23 ▸ CPT2 ▸ TK1 ▸ COPS7A ▸
HIST1H3C ▸ RANBP9 ▸ EIF3F ▸ RANBP1 ▸ DPM1 ▸ RPS3 ▸ RPS20 ▸
RPS6 ▸ RPL4 ▸ CHCHD6 ▸ LETM1 ▸ PIAS4 ▸ RPS23 ▸ MIF ▸
SLC25A5 ▸ PPID ▸ MATR3 ▸ PSMB3 ▸ SMU1 ▸ SNRPB ▸ FDFT1 ▸
SCRIB ▸ EEF2K ▸ HNRNPDL ▸ STX4 ▸ KRT1 ▸ CUL4B ▸ MYO1C ▸
PSMB6 ▸ SF3B3 ▸ ALDH18A1 ▸ MRPS28 ▸ MYH9 ▸ NCL ▸ LIMA1 ▸
NOMO3 ▸ TUBB6 ▸ RAB21 ▸ SSR4 ▸ VDAC1 ▸ MTA2 ▸ APOBEC3C ▸
HIST1H4A ▸ PTRH2 ▸ UBE2C ▸ DDX18 ▸ QKI ▸ NECAP2 ▸ S100A7 ▸
RAD23A ▸ FLOT2 ▸ DIAPH1 ▸ TM9SF2 ▸ SLC25A1 ▸ CHCHD4 ▸ RPL32 ▸
YWHAQ ▸ RPS27A ▸ SLC16A1 ▸ SET ▸ SYNCRIP ▸ PSMB1 ▸ NDUFA8 ▸
CSNK2A1 ▸ GCN1L1 ▸ IDI1 ▸ STIP1 ▸ RAN ▸ GART ▸ DHCR7 ▸
UBE2NL ▸ GSTO1 ▸ CKB ▸ C1QBP ▸ IK ▸ H2AFV ▸ SNRPA ▸
EPHX1 ▸ MYO1B ▸ VAV3 ▸ CUL5 ▸ KARS ▸ MDC1 ▸ GOLGA7 ▸
PRPF19 ▸ KIDINS220 ▸ GTPBP4 ▸ PPP6C ▸ RPN2 ▸ ARL2 ▸ VDAC2 ▸
AP2S1 ▸ HIST1H3B ▸ RPL13A ▸ SRSF5 ▸ SEC61A1 ▸ HSPG2 ▸ UFL1 ▸
RPL15 ▸ RPL31 ▸ GLRX3 ▸ TPM2 ▸ EIF5B ▸ ILF3 ▸ G3BP1 ▸
ENO1 ▸ CAPZA1 ▸ AIMP2 ▸ EEF1E1 ▸ RPS5 ▸ PSMA7 ▸ GNB3 ▸
PPP3CA ▸ RPL28 ▸ GAPDH ▸ SLC25A12 ▸ TRPC4AP ▸ RPL12 ▸ RPL27A ▸
S100A8 ▸ COPS3 ▸ SLC1A5 ▸ RPL14 ▸ SNRNP70 ▸ RPL21 ▸ SCAMP3 ▸
SYNJ2BP ▸ ST13 ▸ POLR1C ▸ RPS16 ▸ FANCD2 ▸ SSB ▸ SLC3A2 ▸
HIST1H3G ▸ MYL6 ▸ CFL1 ▸ MRPL13 ▸ OSBPL8 ▸ PAFAH1B2 ▸ ATXN10 ▸
CCNA2 ▸ FASN ▸ RPL35A ▸ MMS19 ▸ HSPE1 ▸ KRT17 ▸ MACF1 ▸
PDIA3 ▸ DAB2 ▸ RPL8 ▸ ITGAV ▸ ICAM1 ▸ COX4I1 ▸ CCDC47 ▸
RPL10A ▸ ARHGEF1 ▸ CHP1 ▸ HIST1H3F ▸ TUBB4A ▸ HIST1H3D ▸ CSE1L ▸
ESD ▸ PDCD10 ▸ SHMT2 ▸ NPM1 ▸ TECR ▸ CACYBP ▸ CRBN ▸
SART3 ▸ TIAF1 ▸ TOMM22 ▸ PABPC1 ▸ LUZP1 ▸ PPP2R1B ▸ KIAA0368 ▸
SRP9 ▸ GRWD1 ▸ CKS1B ▸ CCT8 ▸ CBLB ▸ MEPCE ▸ PPIH ▸
LUC7L2 ▸ DNAJC11 ▸ GDI2 ▸ NCSTN ▸ ATP5H ▸ TFG ▸ BAX ▸
RPL36 ▸ SRSF10 ▸ PES1 ▸ CLN5 ▸ BMP2K ▸ PCMT1 ▸ ARL8A ▸
CORO1B ▸ SSR3 ▸ STOM ▸ NUP188 ▸ YWHAG ▸ CTTN ▸ FAU ▸
TARS ▸ NDUFS7 ▸ PSMA4 ▸ PPP6R3 ▸ TCERG1 ▸ MISP ▸ CUL2 ▸
HDAC1 ▸ PSMD13 ▸ U2AF2 ▸ VASN ▸ MYO1A ▸ PSMB5 ▸ HSPBP1 ▸
IGF2R ▸ DDX39B ▸ C14orf166 ▸ CPSF7 ▸ SPTAN1 ▸ SRSF11 ▸ TIMM23 ▸
UBE2M ▸ RPL3 ▸ DCAF15 ▸ EIF4A3 ▸ TRIM55 ▸ CBX3 ▸ NUP210 ▸
EMD ▸ GALK1 ▸ LYPLA1 ▸ PPP2R5C ▸ RPA1 ▸ NDUFA5 ▸ ATP2A2 ▸
RNH1 ▸ MAP7D1 ▸ DNAJA4 ▸ SFXN1 ▸ DAPK3 ▸ SRSF9 ▸ COMT ▸
PDCD6 ▸ MCM6 ▸ PFKL ▸ CLTB ▸ KPNB1 ▸ PFKP ▸ MYL12A ▸
MYBBP1A ▸ MAPRE1 ▸ SAR1A ▸ GTF3C3 ▸ CYB5R3 ▸ PPP1CB ▸ SUPT5H ▸
QARS ▸ PSMD12 ▸ TGM2 ▸ PSMA5 ▸ OGDH ▸ PCYOX1 ▸ RPS28 ▸
SKIV2L2 ▸ N6AMT1 ▸ GMPS ▸ RBM12 ▸ TMOD3 ▸ BSG ▸ TUFM ▸
MYL9 ▸ TPM1 ▸ YWHAB ▸ DCAF10 ▸ ARPC3 ▸ DDB1 ▸ ILK ▸
SLC25A6 ▸ CUL3 ▸ FARSB ▸ STAT1 ▸ STOML2 ▸ HNRNPH1 ▸ LRBA ▸
DNAJA1 ▸ HADHA ▸ STRAP ▸ CLPB ▸ SKP2 ▸ RCC2 ▸ SLC25A18 ▸
ARF6 ▸ TNPO3 ▸ CCT5 ▸ BZW1 ▸ MAPRE2 ▸ TBC1D15 ▸ MSN ▸
EEF1G ▸ GRB2 ▸ PSMD3 ▸ TUBA1B ▸ ELAVL1 ▸ RAB14 ▸ SMARCA5 ▸
SAP18 ▸ ATP5C1 ▸ CELF2 ▸ PA2G4 ▸ PAGE1 ▸ PGAM1 ▸ PSMA3 ▸
TUBA4A ▸ MCM3 ▸ AP2A2 ▸ UBC ▸ SEC24C ▸ LGALS1 ▸ MYL12B ▸
HSPA8 ▸ CNOT1 ▸ ITPR3 ▸ ESR1 ▸ PPP2R1A ▸ ECT2 ▸ DHX30 ▸
Data information
Please see the Gene Interactions Track Manual.