Affine Alignment
 
Alignment between CTSG (top ENST00000216336.3 255aa) and CMA1 (bottom ENST00000250378.7 247aa) score 12103

003 PLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSR-CGGFLVREDFVLT 061
    || ||| ||| + ||||||||| | +||||||||||+| +  | |+ |||||+| +||||
005 PLPLLL-FLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLT 063

062 AAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRN 121
    |||| | +| ||||||||   |+| | +   +  |||+||  |+ +|||||+|  +    
064 AAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLT 123

122 RNVNPVALPRAQEGLRPGTLCTVAGWGRVS-MRRGTDTLREVQLRVQRDRQCLRIFGSYD 180
      |  +  |     + || +| ||||||   ++ |+|||+||+||+  | |    |  +|
124 LAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLM-DPQACSHFRDFD 182

181 PRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRT 240
       |+|||+ |+ |+||||||||||||  || ||||||+|   || ||||+| + |||  
183 HNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQ 242

241 TMRS 244
     +++
243 ILQA 246