Affine Alignment
 
Alignment between HOXA6 (top ENST00000222728.3 233aa) and HOXA2 (bottom ENST00000222718.7 376aa) score 4275

089 SPSGSGKQRGPGDYLHFSPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCAG 148
    ||+||     |   |   ||  +  +  + +  ||    |     +   |          
076 SPAGSRGSPVPAGALQ-PPEYPWMKEKKAAKKTALLPAAAAAATAAATGPACLSHKESLE 134

149 AVYGSHG--RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 206
       || |  || |  ||  | ||||||||||+|| | ||+|||  | |||||+|+|||||
135 IADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNR 194

207 RMKWK-----KENKLINSTQPSGEDSE 228
    ||| |     |||+       | ||||
195 RMKHKRQTQCKENQNSEGKCKSLEDSE 221