Affine Alignment
 
Alignment between HOXB6 (top ENST00000225648.4 224aa) and HOXA6 (bottom ENST00000222728.3 233aa) score 11894

001 MSSYFVNSTFPVTLASGQESFLGQLPLYSSGYADPLRHYPAPYGPGPGQDKGFATSSYYP 060
    ||||||| ||| +| |||+||||||||| +|| | || +|| ||     || + +  +| 
001 MSSYFVNPTFPGSLPSGQDSFLGQLPLYQAGY-DALRPFPASYGASSLPDKTYTSPCFYQ 059

061 PAGGGYG-RAAPCDYGPAPAFYREKE-SACALSGADEQP------PFHPEPR---KSDCA 109
     +        |  +|| |  || +|+ |  + ||+ +|        | || +    |   
060 QSNSVLACNRASYEYG-ASCFYSDKDLSGASPSGSGKQRGPGDYLHFSPEQQYKPDSSSG 118

110 QDKSVFGETEEQKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNR 169
    | |++  |  ++| ++||||||||||||  + +|  |||||||||||||||||||||+||
119 QGKALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNR 178

170 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKQAE 224
    |||||||||||+|||||||||||||||||||||||+||++++| | |+ | |  |
179 YLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSEAKAGE 233