Affine Alignment
 
Alignment between HOXB6 (top ENST00000225648.4 224aa) and HOXB9 (bottom ENST00000311177.7 250aa) score 4085

001 MSSYFVNSTF--------PVTLASGQE-----------------SFLGQLPLYSSGYADP 035
    +|||+|+|          |    |||                  ||  + |++ + +|  
007 LSSYYVDSIISHESEDAPPAKFPSGQYASSRQPGHAEHLEFPSCSFQPKAPVFGASWAPL 066

036 LRH-----------YPAPYGPGPGQDKGFATSSYYPPAG---GGYGRAA----PCDYGPA 077
      |           |  | |  | + +   |     | |    | |+||    |    | 
067 SPHASGSLPSVYHPYIQPQGVPPAESRYLRTWLEPAPRGEAAPGQGQAAVKAEPLLGAPG 126

078 PAF------YREKESACALSGADEQPPFHPEPRKSDCAQDKSVFGETEEQKCSTPVYPWM 131
             |  + ||   +    | | + + +  + ++||      |    + |   |+
127 ELLKQGTPEYSLETSAGREAVLSNQRPGYGDNKICEGSEDK------ERPDQTNPSANWL 180

132 QRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIK 191
       +|          |+ |  ||+|||||||||| +| |||| || |+|  | |+|||+|
181 HARSS----------RKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVK 230

192 IWFQNRRMKWKKESK 206
    ||||||||| || +|
231 IWFQNRRMKMKKMNK 245