Alignment between HLA-DOA (top ENST00000229829.7 250aa) and HLA-DQA2 (bottom ENST00000374940.4 255aa) score 13680

001 MALRAGLVLGFHTLMTLLSPQEAGATKADHMGSYGPAFYQSYGASGQFTHEFDEEQLFSV 060
    | |   |+||   |  ++||       |||+ |||  ||||+| |||+||||| ++ | |
001 MILNKALLLGALALTAVMSPCGGEDIVADHVASYGVNFYQSHGPSGQYTHEFDGDEEFYV 060

061 DLKKSEAVWRLPEFGDFARFDPQGGLAGIAAIKAHLDILVERSNRSRAINVPPRVTVLPK 120
    ||+  | ||+|| |  |  ||||  |  +|  |  |+ ++ +|| + | |  | |||  |
061 DLETKETVWQLPMFSKFISFDPQSALRNMAVGKHTLEFMMRQSNSTAATNEVPEVTVFSK 120

121 SRVELGQPNILICIVDNIFPPVINITWLRNGQTVTEGVAQTSFYSQPDHLFRKFHYLPFV 180
      | ||||| |||+||||||||+||||| || +|||||++||| |+ || | |  || |+
121 FPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFL 180

181 PSAEDVYDCQVEHWGLDAPLLRHWELQVPIPPPDAMETLVCALGLAIGLVGFLVGTVLII 240
    |||+++|||+||||||| |||+||| ++| |  +  |||||||||++||+| +|||| ||
181 PSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETLVCALGLSVGLMGIVVGTVFII 240

241 MG 242
     |
241 QG 242