Affine Alignment
 
Alignment between CDX1 (top ENST00000231656.13 265aa) and ISX (bottom ENST00000404699.7 245aa) score 2983

122 PSSPGAQRPTPYEWMRRSVAAGGGGGSGK---------TRTKDKYRVVYTDHQRLELEKE 172
    |  || + |          ||  | |  |          ++| + |  +|  |  |||| 
049 PEGPGEEGP--------GEAAASGSGLEKPPKDQPQEGRKSKRRVRTTFTTEQLHELEKI 100

173 FHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNK--KKQQQQQPPQPPMAHD 230
    ||++ |  +  +|+||| + | | +|+|||||+||| ||  |       ||  +  +|  
101 FHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKIGNLGAPQQLSEASVALP 160

231 ITATPAGPS 239
         |||+
161 TNLDVAGPT 169