Affine Alignment
 
Alignment between HOXD9 (top ENST00000249499.8 352aa) and HOXB6 (bottom ENST00000225648.4 224aa) score 4484

223 GTGPGAGIGAATGT------GGSSEPSACSDHPIP--------GCSLKEEEKQ---HSQP 265
    | |||   | || +      ||    + |   | |         |+|   ++|   | +|
044 GPGPGQDKGFATSSYYPPAGGGYGRAAPCDYGPAPAFYREKESACALSGADEQPPFHPEP 103

266 QQ-------------QQLDPNNPAANWIH----------ARSTRKKRCPYTKYQTLELEK 302
    ++             ++   + |   |+             | |+ |  ||+||||||||
104 RKSDCAQDKSVFGETEEQKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEK 163

303 EFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMSK 345
    || +| |||| || |+|  | |||||+|||||||||| || ||
164 EFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 206