Affine Alignment
 
Alignment between ATP5F1B (top ENST00000262030.8 529aa) and ATP5F1A (bottom ENST00000398752.11 553aa) score 5168

007 RVAAAPASGALRRLTPSASLPPAQLLLR-AAPTAVHPVRDYAAQTSPSPKAGAATGRIV- 064
    |||||      ||         | |+ | |  ++    |++ |  +   | | |    + 
005 RVAAAVVRALPRR---------AGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSIL 055

065 --AVIGAVVDVQFDE---------GLPPILNALEVQGRE----TRLVLEVAQHLGESTVR 109
       ++||   |  +|         |+  +     ||  |    +  +  ++ +|    | 
056 EERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVG 115

110 TIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAE 169
     +     + +  |  |  +|| + +||| | |||+++ +|  || +||| +|    +  +
116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175

170 APEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 229
    ||  +     +| + |||| || | |  +| +  + |    ||| + ++ | |  + + |
176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDG 235

230 -------YSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARV 282
           | ++  +|++      |   + ++      ||     +|    ++    +   
236 SDEKKKLYCIYVAIGQKRSTVAQLVKRLTDA------DAMKYTIVVSATASDAAPLQYLA 289

283 ALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTM 342
      +| ++ |||||  |+  |+  |++ +   |  ++| || | |    |   +      +
290 PYSGCSMGEYFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348

343 QERITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 398
     ||          ||+|++  |   | |++   |    +  |    |   +   || ||+
349 LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408

399 DPLDSTSRIMDPNIVGSEHYDVARGVQKI-LQDYKSLQDIIAILGMDELSEEDKLTVSRA 457
    +   | ||+   +   +       |  |+ |  |+ +    |  | | |    +  +|| 
409 NVGLSVSRV--GSAAQTRAMKQVAGTMKLELAQYREVA-AFAQFGSD-LDAATQQLLSRG 464

458 RKIQRFLSQ----PF----QVAEVFT---GHMGKLVPLKET 487
     ++   | |    |     ||| ++    |++ || | | |
465 VRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505