Affine Alignment
 
Alignment between PITX1 (top ENST00000265340.12 314aa) and LHX3 (bottom ENST00000371748.10 397aa) score 2071

077 CGGADDPAKKKK----QRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPR 132
    |    + ||+++     +| ||  |++||+ |++ +  +  |   +||+++  | |    
141 CKADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRV 200

133 VRVWFKNRRAKWRKRERNQQLDLCKGGYVPQFSGLVQPYEDVYAAGYSYNNWAAKSLAPA 192
    |+|||+|||||    |+  + |  +  +   |  + +      + | | ++  +      
201 VQVWFQNRRAK----EKRLKKDAGRQRWGQYFRNMKR------SRGGSKSDKDSVQEGQD 250

193 PLSTKSFTFFNSMSPLSSQSMFSAPSSISSMTMPSSMG-PGAVPGMPNSGLNNIN----N 247
      +  ||    |++ +   +            +  |+| |    | |+  | | +     
251 SDAEVSFPDEPSLAEMGPAN-----------GLYGSLGEPTQALGRPSGALGNFSLEHGG 299

248 LTGSSLNSAMSPGACPYGTPASP 270
    | |      + ||+ ||| | ||
300 LAGPEQYRELRPGS-PYGVPPSP 321