Affine Alignment
 
Alignment between SEMA3A (top ENST00000265362.9 771aa) and SEMA3E (bottom ENST00000643230.2 775aa) score 38684

007 IVCLFWGVLLTARANYQNGKNNVPRLKLSYKEMLESNNVITFNGLANSSSYHTFLLDEER 066
    |  | || ||             |||+||+||+|  |    |+        || |||| +
008 ITLLLWGYLLELWTGGHTADTTHPRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQ 067

067 SRLYVGAKDHIFSFDLVNIKD-FQKIVWPVSYTRRDECKWAGKDILKECANFIKVLKAYN 125
     ||+|| +| ++|  |  | | +++| || +  + +||   |||   ||||+++||  ||
068 ERLFVGGRDLVYSLSLERISDGYKEIHWPSTALKMEECIMKGKD-AGECANYVRVLHHYN 126

126 QTHLYACGTGAFHPICTYIEIGHHPEDNIFKLENSHFENGRGKSPYDPKLLTASLLIDGE 185
    +|||  |||||| |+| +| +|+| || +| ||+   | |||+ |+||     | ||  |
127 RTHLLTCGTGAFDPVCAFIRVGYHLEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSE 186

186 LYSGTAADFMGRDFAIFRTLGHHHPIRTEQHDSRWLNDPKFISAHLISESDNPEDDKVYF 245
    |++|  +|+  || ||||++|    ||||  | | | +|||+ +++| ++++ +|+||||
187 LFAGLYSDYWSRDAAIFRSMGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYF 246

246 FFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHF 305
    || | |++ |++  | + |+|++| || || | |||||+|||||||+||||| |||||+|
247 FFTEKALEAENNAHAIYTRVGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYF 306

306 DELQDVFLMNFKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGPNYQ 365
    |||+||||+  +| ||||++|+| |+||||+| |+|+| || +|  | |||||++|| | 
307 DELEDVFLLPTRDHKNPVIFGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYH 366

366 WVPYQGRVPYPRPGTCPSKTFGG-FDSTKDLPDDVITFARSHPAMYNPVFPMNNRPIVIK 424
    |  |+|+|||||||+| ||  || + +||| ||| | |||||| ||  + | + +||++|
367 WSVYEGKVPYPRPGSCASKVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVK 426

425 TDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSIPKETWYDLEEVLLEEMTVFR 484
    ||  |   || ||||+||||||||+||||| | ||||++|  +    +|||+|||+ +|+
427 TDGKYNLKQIAVDRVEAEDGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFK 486

485 EPTAISAMELSTKQQQLYIGSTAGVAQLPLHRCDIYGKACAECCLARDPYCAWDGSACSR 544
    +|  | +||+|+|+||||||| + |||+  | ||+|| |||+||||||||||||| +|||
487 DPVPIISMEISSKRQQLYIGSASAVAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSR 546

545 YFPT---AKRRTRRQDIRNGDPLTHCSDLHHDNHHGHSPEERIIYGVENSSTFLECSPKS 601
    |+||   |||| ||||+|+|+    |             || + ||+||+|| |||+|+|
547 YYPTGTHAKRRFRRQDVRHGNAAQQCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRS 606

602 QRALVYWQFQRRNEERKEEIRVDDHIIRTDQGLLLRSLQQKDSGNYLCHAVEHGFIQTLL 661
     +| | |  |+  | ||||++ || +++ | |||   | + |+| | |  ||| |+ |+ 
607 LQAKVIWFVQKGRETRKEEVKTDDRVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVR 666

662 KVTLEVIDTEHLEELLHKDDDGDGSKTK--EMSNSMTPSQKVWYRDFMQLINHPNLNTMD 719
    |+||||++ | +|++ +|||+ |          +|++   | ||++|+||| + |   ++
667 KITLEVVEEEKVEDMFNKDDEEDRHHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVE 726

720 EFCEQVWKRDRKQRRQRPGHTPGNSNKWKHLQENKKGRNRRTHEFERAPR 769
    |+||+||  |||+++ +      + +|||+    +| + |   |  | ||
727 EYCEKVWCTDRKRKKLKM-----SPSKWKYANPQEK-KLRSKPEHYRLPR 770