Affine Alignment
 
Alignment between TMPRSS11D (top ENST00000283916.11 418aa) and TMPRSS11B (bottom ENST00000332644.6 416aa) score 15409

001 MYRPARVTSTSRFLNPYVVCFIVVAGVVILAVTIALLVYFLAFDQKSYFYRSSFQLLNVE 060
    |||     |+ |    +   || +    || ||| |||+|||  +|+|+|+  | +  | 
001 MYRHG--ISSQRSWPLWTTIFIFLGVAAILGVTIGLLVHFLAV-EKTYYYQGDFHISGVT 057

061 YNSQLNSPATQEYRTLSGRIESLITKTFKESNLRNQFIRAHVAKLRQDGSGVRADVVMKF 120
    ||    + |+|    ||  ||+ +   |+ |++  +++++ | ||  + +|    + +||
058 YNDNCENAASQASTNLSKDIETKMLNAFQNSSIYKEYVKSEVIKLLPNANGSNVQLQLKF 117

121 QFTRNNNGASMKSRIESVLRQML-NNSGNLEINPSTEITSLTDQAAANWLINE-CGAGPD 178
    +|     | ||+++|++ | ||| ||  +    |++       +||+  | |  ||    
118 KFP-PAEGVSMRTKIKAKLHQMLKNNMASWNAVPASIKLMEISKAASEMLTNNCCGRQVA 176

179 LITLSEQRILGGTEAEEGSWPWQVSLRLNNAHHCGGSLINNMWILTAAHCFRSNSNPRDW 238
       ++  +|+ |  + ||+|||| |++    |+|| |||++ |+|+|||||   +| +||
177 NSIITGNKIVNGKSSLEGAWPWQASMQWKGRHYCGASLISSRWLLSAAHCFAKKNNSKDW 236

239 IATSGISTTFPKLRMRVRNILIHNNYKSATHENDIALVRLENSVTFTKDIHSVCLPAATQ 298
        ||    | +  +|+||+ | || |    +|||||+|   |+||+ |  +||| |  
237 TVNFGIVVNKPYMTRKVQNIIFHENYSSPGLHDDIALVQLAEEVSFTEYIRKICLPEAKM 296

299 NIPPGSTAYVTGWGAQEYAGHTVPELRQGQVRIISNDVCNAPHSYNGAILSGMLCAGVPQ 358
     +       |||||     |     |++  ++|| | +||| ++|+| +   |||||   
297 KLSENDNVVVTGWGTLYMNGSFPVILQEDFLKIIDNKICNASYAYSGFVTDTMLCAGFMS 356

359 GGVDACQGDSGGPLVQEDSRRLWFIVGIVSWGDQCGLPDKPGVYTRVTAYLDWIRQQTGI 418
    |  |||| ||||||   ||| +| +|||||||| ||  +|||||||||+| +||  +||+
357 GEADACQNDSGGPLAYPDSRNIWHLVGIVSWGDGCGKKNKPGVYTRVTSYRNWITSKTGL 416