Affine Alignment
 
Alignment between HOXA10 (top ENST00000283921.5 410aa) and HOXC9 (bottom ENST00000303450.5 260aa) score 6631

175 ADKCPKVSATAAELAPFPRGPPPDGCALGTSSGVPVPGYFRLSQA------------YGT 222
    | + |   |  |  |  | |  ||     + |  | |  |  | |            || 
025 ASRFPATGAHPA--AARPSGLVPDCSDFPSCSFAPKPAVFSTSWAPVPSQSSVVYHPYGP 082

223 AKGYGSGGGGAQQ-----LGAGPFPAQPP-GRGFDLPPALASGSADAARKERALDSPPPP 276
        |+     +       ||  ||+ |  || + | |                |+ |  
083 QPHLGADTRYMRTWLEPLSGAVSFPSFPAGGRHYALKP----------------DAYPGR 126

277 TLACGSGGGSQGDEEAHASSSAAEELSPAPSESSKASPEKDSLGNSKGEN---------- 326
       || | |    +  + |     + +|     +  ||| |+|  || +           
127 RADCGPGEGRSYPDYMYGSPGELRDRAP----QTLPSPEADALAGSKHKEEKADLDPSNP 182

327 AANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQN 386
     |||+ |+| |||||||||+|||||||||||||||||+|| |++| ++||+|||||||||
183 VANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQN 242

387 RRMKLKKMNRENRIRE 402
    ||||+||||+|   +|
243 RRMKMKKMNKEKTDKE 258