Affine Alignment
 
Alignment between KCNMA1 (top ENST00000286628.14 1236aa) and KCNQ4 (bottom ENST00000347132.10 695aa) score 2033

182 VLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAA----- 236
    | +| |    ||+  + +   |+  |    +  | ++    | | | + +|  +|     
103 VFIFLLVFSCLVLSVLST---IQEHQELANECLLILEFVMIVVFGLEYIVRVWSAGCCCR 159

237 ----NDKLWFWLEVNSVVDFFT-VPPVFV-------SVYLNRSWLGLRFLRALRLIQFSE 284
          +  |  +   |+||   |  | |       +++   +   +|||+ ||+++   
160 YRGWQGRFRFARKPFCVIDFIVFVASVAVIAAGTQGNIFATSALRSMRFLQILRMVRMDR 219

285 ---ILQFLNILKTSNSIKLVNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWE 341
         + |  +  ++| +|+    |     + |+  ++| |          |+   +| +
220 RGGTWKLLGSVVYAHSKELITAWYIGFLVLIFASFLVYLAEKDA-------NSDFSSYAD 272

342 CVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFA 381
     ++   +|++|+||||    | |||+    | | |++ ||
273 SLWWGTITLTTIGYGDKTPHTWLGRVLAAGFALLGISFFA 312