Affine Alignment
 
Alignment between VCAM1 (top ENST00000294728.7 739aa) and CD4 (bottom ENST00000011653.9 458aa) score 2223

272 GNATLTLIAMRMEDSGIYVCEGVNLIGKNRKEVELIVQEKPFTVEISPGPRIAAQIGDSV 331
    ||  | +  +++|||  |+||    +   ++||+|+|    | +  +    +    | |+
090 GNFPLIIKNLKIEDSDTYICE----VEDQKEEVQLLV----FGLTANSDTHLLQ--GQSL 139

332 MLTCSVMGCESPSFSWRTQIDSPLSGKVRSEGTNSTLTLSPVSFENEHSYLCTVTCGHKK 391
     ||       |||   |+     + |         ||++| +  ++  ++ |||    ||
140 TLTLESPPGSSPSVQCRSPRGKNIQG-------GKTLSVSQLELQDSGTWTCTVLQNQKK 192

392 LEKGIQVELYSFPRDPEIEMSGGLVNGSSVTVSCKVPSVYPLDRL--EIELLKGETILEN 449
    +|  | + + +| +   |     +       |    |  + +++|    ||        +
193 VEFKIDIVVLAFQKASSI-----VYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASS 247

450 IEFLEDTDMKSLENKSLEMTFIPTIEDTGKALVCQAKLHIDDMEFEPKQRQS-TQTLYVN 508
     +     |+|+ |     +|  | ++  || |     ||+   +  |+   |   || + 
248 SKSWITFDLKNKEVSVKRVTQDPKLQ-MGKKL----PLHLTLPQALPQYAGSGNLTLALE 302

509 VAP----RDTTVLVSPSSILEEGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATL 564
           ++  ++|  ++ |++    |+||   |  +||++ | +| | | +       +
303 AKTGKLHQEVNLVVMRATQLQK----NLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAV 358

565 TLISTK-------MEDSGVYLCE 580
     +++ +       + |||  | |
359 WVLNPEAGMWQCLLSDSGQVLLE 381