Affine Alignment
 
Alignment between SOX17 (top ENST00000297316.5 414aa) and SOX18 (bottom ENST00000340356.9 384aa) score 12122

003 SPDAGYASDDQSQTQSALPAVMAGLGPCPWAESLSPIGDMKVKGEAPANSGAPAGAAGR- 061
    +|  | |+|  ++  +| || +|   |   |   ||        |      +|||   | 
023 APGHGAAAD--TRGLAAGPAALA--APAAPASPPSPQRSPPRSPEPGRYGLSPAGRGERQ 078

062 AKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEA 121
    |  |||||||||||||||||||||||||||||||| |||||||+|| |  ||||||||||
079 AADESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEA 138

122 ERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGG-FLHGLAEPQAAALGPEGGRVAMDGLG 180
    |||||||++|||||||||||+|| ++ +|+| |  | ||| ||                 
139 ERLRVQHLRDHPNYKYRPRRKKQARKARRLEPGLLLPGLAPPQP---------------- 182

181 LQFPEQGFPAGPPLLPPHMGGHYRDCQSLGAPPLDGYPLPTPDTSPLDGVDP-DPAFFAA 239
       | + |||            +|+   |||   ||  ||||+ |||||++| + |||  
183 ---PPEPFPAA-----SGSARAFRELPPLGA-EFDGLGLPTPERSPLDGLEPGEAAFFPP 233

240 P-MPGDC---PAAGTYSYAQVSDYAGPPEPPAGPMHPRLGPEPAGPSIPGLLAPPSALHV 295
    |  | ||   |    |+  ++|    |      |+   |   |    + ||         
234 PAAPEDCALRPFRAPYAPTELS--RDPGGCYGAPLAEALRTAPPAAPLAGL--------- 282

296 YYGAMGSPGAGGGRGFQMQPQHQHQHQHQHHPPGPGQPSPPPEALPCRDGTDPSQPAELL 355
    ||| +|+||                       | ||  |||||| |          |+| 
283 YYGTLGTPG-----------------------PYPGPLSPPPEAPPLESAEPLGPAADLW 319

356 GEVDRTEFEQYLHFV-CKPEM-GLPY-----QGHDSGVNLPDSHGAISSVVSDASSAVYY 408
     +|| |||+|||+    +|+  ||||     +     ++ |+    ||+ +|||||||||
320 ADVDLTEFDQYLNCSRTRPDAPGLPYHVALAKLGPRAMSCPEESSLISA-LSDASSAVYY 378