Affine Alignment
 
Alignment between MMP3 (top ENST00000299855.10 477aa) and MMP1 (bottom ENST00000315274.7 469aa) score 25840

001 MKSLPILLLLCVAVCSAYPLDGAARGEDTSMNLVQKYLENYYDLKKDVKQFVRRKDSGPV 060
    | | | ||||      ++        ++  ++||||||| ||+|| | +|  +|++||||
001 MHSFPPLLLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPV 060

061 VKKIREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGIPKWRKTHLTYRIVN 120
    |+|+++||+| ||+|||| |++||+||++||||||||  |    | |+| +||||||| |
061 VEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIEN 120

121 YTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNV 180
    ||||||+  || |+||| ++|  ||||||+++ ||+|||||||   +| |  ||||||  
121 YTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGN 180

181 LAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLY 240
    ||||+ ||||| ||||||+||+|| +    ||  |||||+|||||| || +  ||||| |
181 LAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSY 240

241 HSLTDLTRFRLSQDDINGIQSLYGPPPDSPETPLVPTEPVPPEPGTPANCDPALSFDAVS 300
        |+   +|+||||+|||++||   +       | +|+ |+  ||  ||  |+|||++
241 TFSGDV---QLAQDDIDGIQAIYGRSQN-------PVQPIGPQ--TPKACDSKLTFDAIT 288

301 TLRGEILIFKDRHFWRKSLRKLEPELHLISSFWPSLPSGVDAAYEVTSKDLVFIFKGNQF 360
    |+|||++ |||| + | +    | ||+ || ||| ||+|++||||   +| |  ||||++
289 TIRGEVMFFKDRFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKY 348

361 WAIRGNEVRAGYPRGIH-TLGFPPTVRKIDAAISDKEKNKTYFFVEDKYWRFDEKRNSME 419
    ||++|  |  |||+ |+ + ||| ||+ ||||+|++   |||||| +||||+|| + ||+
349 WAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMD 408

420 PGFPKQIAEDFPGIDSKIDAVFEEFGFFYFFTGSSQLEFDPNAKKVTHTLKSNSWLNC 477
    ||+|| || |||||  |+|||| + |||||| |+ | +|||  |++    |+||| ||
409 PGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNC 466