Affine Alignment
 
Alignment between TMPRSS11E (top ENST00000305363.9 423aa) and TMPRSS11B (bottom ENST00000332644.6 416aa) score 15352

002 MYRPDVVRARKRVCWEPWVIGLVIFISLIVLAVCIGLTVHYVRYNQKKTYNYYSTLSFTT 061
    |||  +   |    |  |    +      +| | ||| ||++    +||| |      + 
001 MYRHGISSQRS---WPLWTTIFIFLGVAAILGVTIGLLVHFLAV--EKTYYYQGDFHISG 055

062 DKLYAEFGREASNNFTEMSQRLESMVKNAFYKSPLREEFVKSQVIKFSQQKHGVLAHMLL 121
              ||   | +|+ +|+ + |||  | + +|+|||+|||     +|    + |
056 VTYNDNCENAASQASTNLSKDIETKMLNAFQNSSIYKEYVKSEVIKLLPNANGSNVQLQL 115

122 ICRFHSTEDPETVDKIVQLVLHEKLQDAVGPPKVDPHSVKIKKINKTETDSYLNHCCGTR 181
      +|   |      || +  ||+ |++ +      | |+|+ +|+|  ++   |+||| +
116 KFKFPPAEGVSMRTKI-KAKLHQMLKNNMASWNAVPASIKLMEISKAASEMLTNNCCGRQ 174

182 RSKTLGQSLRIVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPA 241
     + ++    +|| |    || ||||||+|| | | |||+||++ ||+||||||    |  
175 VANSIITGNKIVNGKSSLEGAWPWQASMQWKGRHYCGASLISSRWLLSAAHCFAKKNNSK 234

242 RWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDA 301
     || +||+ +    | | ++ || || |  |    ||+| +|+  | +|  + ++|||+|
235 DWTVNFGIVVNKPYMTRKVQNIIFHENYSSPGLHDDIALVQLAEEVSFTEYIRKICLPEA 294

302 SYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGS 361
      +    | + |||+| |  +|     |++  + +||   ||   ||+  +|  ||||| 
295 KMKLSENDNVVVTGWGTLYMNGSFPVILQEDFLKIIDNKICNASYAYSGFVTDTMLCAGF 354

362 LEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSKT 421
    + |+ |||| ||||||   |+|+||+| ||||||| | | ||||||||||+ |+||||||
355 MSGEADACQNDSGGPLAYPDSRNIWHLVGIVSWGDGCGKKNKPGVYTRVTSYRNWITSKT 414

422 GI 423
    |+
415 GL 416