Affine Alignment
 
Alignment between TMPRSS11E (top ENST00000305363.9 423aa) and TMPRSS11F (bottom ENST00000356291.3 438aa) score 17138

001 MMYRP------DVVRA---RKRVCWEPWVIGLVIFISLIVLAVCIGLTVHYVRYNQKKTY 051
    ||| |      +  ||   ||+  |+   + |     + ++ + ||+  |+|  + |  |
001 MMYAPVEFSEAEFSRAEYQRKQQFWDSVRLALFTLAIVAIIGIAIGIVTHFVVEDDKSFY 060

052 NYYSTLSFTTDKLYAEFGREASNNFTEMSQRLESMVKNAFYKSPLREEFVKSQVIKFSQQ 111
     | ++   |  |    +|  +|  | | | ++| |+   |  | +   |+|| ||| |  
061 -YLASFKVTNIKYKENYGIRSSREFIERSHQIERMMSRIFRHSSVGGRFIKSHVIKLSPD 119

112 KHGVLAHMLLICRFHSTEDPETVDKIVQLVLHEKLQDAVGPPKVDPHSVKIKKINKTETD 171
    + ||   ++|| |+ ||+  | + | ++  |++ |+       ++  | ++  |+  +  
120 EQGVDILIVLIFRYPSTDSAEQIKKKIEKALYQSLKTKQLSLTINKPSFRLTPIDSKKMR 179

172 SYLNHCCGTRRSKT------LGQSLRIVGGTEVE-EGEWPWQASLQWDGS-HRCGATLIN 223
    + ||  || | + +         + ||| | |   |||||||||||  || |+|||+||+
180 NLLNSRCGIRMTSSNMPLPASSSTQRIVQGRETAMEGEWPWQASLQLIGSGHQCGASLIS 239

224 ATWLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAEL 283
     |||++|||||   |+| +| |+|| || |  +|| +|+||+|| |   +++ ||+| +|
240 NTWLLTAAHCFWKNKDPTQWIATFGATITPPAVKRNVRKIILHENYHRETNENDIALVQL 299

284 SSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCN 343
    |+ | ++| | ||||||+| +  |   +||||||++ +||  || ||||+|  |    ||
300 STGVEFSNIVQRVCLPDSSIKLPPKTSVFVTGFGSIVDDGPIQNTLRQARVETISTDVCN 359

344 EPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNK 403
        |+  ||| ||||| +||| |||+||||||||  |  ||||+ ||||||  || | |
360 RKDVYDGLITPGMLCAGFMEGKIDACKGDSGGPLV-YDNHDIWYIVGIVSWGQSCALPKK 418

404 PGVYTRVTALRDWITSKTGI 423
    ||||||||  |||| ||||+
419 PGVYTRVTKYRDWIASKTGM 438